YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: EA6_ARATH
Organism: Arabidopsis thaliana
Length: 478 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EA6_ARATH.

Description E-value Query
Range
Subject
Range
gi|17738, gi|322641 - pir||S31712 beta-1,3-glucanase homolog (clone A6) - rape (fragment), gi|17738|emb|CAA49513.1| beta-1...
496.0 [0..6] [478..1]

Back

Predicted Domain #1
Region A:
Residues: [1-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLAFFLFT ILVFSSSCCS ATRFQGHRYM QRKTMLDLAS KIGINYGRRG NNLPSPYQSI  60
   61 NFIKSIKAGH VKLYDADPES LTLLSQTNLY VTITVPNHQI TALSSNQTIA DEWVRTNILP 120
  121 YYPQTQIRFV LVGNEILSYN SGNVSVNLVP AMRKIVNSLR LHGIHNIKVG TPLAMDSLRS 180
  181 SFPPSNGTFR EEITGPVMLP LLKFLNGTNS YFFLNVHPYF RWSRNPMNTS LDFALFQGHS 240
  241 TYTDPQTGLV YRNLLDQMLD SVLFAMTKLG YPHMRLAISE TGWPNFGDID ETGANILNAA 300
  301 TYNRNLIKKM SASPPIGTPS RPGLPIPTFV FSLFNENQKS GSGTQRHWGI LHPDGSPIYD 360
  361 VDFTGQTPLT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.69897
Match: 2cygA
Description: Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.32563207632796 bayes_pls_golite062009
hydrolase activity 0.85514037342026 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 0.80912338090552 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 0.41375210927547 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [371-478]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFNPLPKPTN NVPYKGQVWC VPVEGANETE LEETLRMACA QSNTTCAALA PGRECYEPVS  60
   61 IYWHASYALN SYWAQFRNQS IQCFFNGLAH ETTTNPGNDR CKFPSVTL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 34.823909
Match: PF07983.4
Description: No description for PF07983.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle