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View Structure Prediction Details

Protein: DRL41_ARATH
Organism: Arabidopsis thaliana
Length: 415 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DRL41_ARATH.

Description E-value Query
Range
Subject
Range
gi|55770563 - ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cultivar-group...
gi|115434762, gi... - gi|55770563|ref|XP_550272.1| putative receptor-like protein kinase INRPK1 [Oryza sativa (japonica cu...
284.0 [0..23] [415..262]

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Predicted Domain #1
Region A:
Residues: [1-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNSIQSFD ALPHNLRECF LDMASFLEDQ RIIASTIIDL WSASYGKEGM NNLQDLASRN  60
   61 LLKLLPIGRN EYEDGFYNEL LVKQDNVLRE FAINQCLKES SSIFERKRLN LEIQDNKFPN 120
  121 WCLNPKQPIV INASLFSIST DDSFASSWFE MDCPNVEALV LNISSSNYAL PNFIATMKEL 180
  181 KVVIIINHGL EPAKLTNLSC LSSLPNLKRI RFEKVSISLL DIPKLGLKSL EKLSLWFCHV 240
  241 VDALNELEDV SETLQSLQEI EIDYCYNLDE LPYWISQVVS LKKLSVTNCN KLCRVIEAIG 300
  301 DLRDLETLRL SSCASLLELP ETIDRLDNLR FLDVSGGFQL KNLPLEIGKL KKLEKISMKD 360
  361 CYRCELPDSV KNLENLEVKC DEDTAFLWKI LKPEMKNLTI TEEKTEHNLN LLQLF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.221849
Match: 2a0zA
Description: The molecular structure of toll-like receptor 3 ligand binding domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle