| Protein: | DRL16_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 967 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DRL16_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
437.0 | [0..1] | [893..1] |
|
Region A: Residues: [1-136] |
1 11 21 31 41 51
| | | | | |
1 MGNFVCIEIS GDQMLDRIIR CLCGKGYIRN LEKNLRALQR EMEDLRATQH EVQNKVAREE 60
61 SRHQQRLEAV QVWLDRVNSI DIECKDLLSV SPVELQKLCL CGLCSKYVCS SYKYGKRVFL 120
121 LLEEVTKLKS EGNFDE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [137-400] |
1 11 21 31 41 51
| | | | | |
1 VSQPPPRSEV EERPTQPTIG QEEMLKKAWN RLMEDGVGIM GLHGMGGVGK TTLFKKIHNK 60
61 FAETGGTFDI VIWIVVSQGA KLSKLQEDIA EKLHLCDDLW KNKNESDKAT DIHRVLKGKR 120
121 FVLMLDDIWE KVDLEAIGIP YPSEVNKCKV AFTTRDQKVC GQMGDHKPMQ VKCLEPEDAW 180
181 ELFKNKVGDN TLRSDPVIVG LAREVAQKCR GLPLALSCIG ETMASKTMVQ EWEHAIDVLT 240
241 RSAAEFSDMQ NKILPILKYS YDSL
|
| Detection Method: | |
| Confidence: | 8.30103 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [401-967] |
1 11 21 31 41 51
| | | | | |
1 EDEHIKSCFL YCALFPEDDK IDTKTLINKW ICEGFIGEDQ VIKRARNKGY EMLGTLIRAN 60
61 LLTNDRGFVK WHVVMHDVVR EMALWIASDF GKQKENYVVR ARVGLHEIPK VKDWGAVRRM 120
121 SLMMNEIEEI TCESKCSELT TLFLQSNQLK NLSGEFIRYM QKLVVLDLSH NPDFNELPEQ 180
181 ISGLVSLQYL DLSWTRIEQL PVGLKELKKL IFLNLCFTER LCSISGISRL LSLRWLSLRE 240
241 SNVHGDASVL KELQQLENLQ DLRITESAEL ISLDQRLAKL ISVLRIEGFL QKPFDLSFLA 300
301 SMENLYGLLV ENSYFSEINI KCRESETESS YLHINPKIPC FTNLTGLIIM KCHSMKDLTW 360
361 ILFAPNLVNL DIRDSREVGE IINKEKAINL TSIITPFQKL ERLFLYGLPK LESIYWSPLP 420
421 FPLLSNIVVK YCPKLRKLPL NATSVPLVEE FEIRMDPPEQ ENELEWEDED TKNRFLPSIK 480
481 PLVRRLKIHY SGMGFLNVKN QNPRFFFYCF IYLLVVHLDC IIDLHSDTSG MCCVVHLDYV 540
541 FHFPFVFPKT FCILFRLHFY TIKSLCV
|
| Detection Method: | |
| Confidence: | 20.0 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
