| Protein: | DRL15_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 889 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DRL15_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
449.0 | [0..1] | [889..1] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MGSCFSLQVS DQTLNRIFNC LIGKSYIRTL EKNLRALQRE MEDLRAIQHE VQNKVARDEA 60
61 RHQRRLEAVQ VWLDRVNSVD IECKDLLSVT PVELQKLCLC GLCSKYV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.900 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
|
Region A: Residues: [108-300] |
1 11 21 31 41 51
| | | | | |
1 CSSYKYGKKV FLLLEEVKKL NSEGNFDEVS QPPPRSEVEE RPTQPTIGQE DMLEKAWNRL 60
61 MEDGVGIMGL HGMGGVGKTT LFKKIHNKFA EIGGTFDIVI WIVVSKGVMI SKLQEDIAEK 120
121 LHLCDDLWKN KNESDKATDI HRVLKGKRFV LMLDDIWEKV DLEAIGIPYP SEVNKCKVAF 180
181 TTRSREVCGE MGD
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [301-889] |
1 11 21 31 41 51
| | | | | |
1 HKPMQVNCLE PEDAWELFKN KVGDNTLSSD PVIVELAREV AQKCRGLPLA LNVIGETMSS 60
61 KTMVQEWEHA IHVFNTSAAE FSDMQNKILP ILKYSYDSLG DEHIKSCFLY CALFPEDGEI 120
121 YNEKLIDYWI CEGFIGEDQV IKRARNKGYA MLGTLTRANL LTKVGTYYCV MHDVVREMAL 180
181 WIASDFGKQK ENFVVQAGVG LHEIPKVKDW GAVRKMSLMD NDIEEITCES KCSELTTLFL 240
241 QSNKLKNLPG AFIRYMQKLV VLDLSYNRDF NKLPEQISGL VSLQFLDLSN TSIEHMPIGL 300
301 KELKKLTFLD LTYTDRLCSI SGISRLLSLR LLRLLGSKVH GDASVLKELQ QLQNLQELAI 360
361 TVSAELISLD QRLAKLISNL CIEGFLQKPF DLSFLASMEN LSSLRVENSY FSEIKCRESE 420
421 TESSYLRINP KIPCFTNLSR LEIMKCHSMK DLTWILFAPN LVVLLIEDSR EVGEIINKEK 480
481 ATNLTSITPF LKLEWLILYN LPKLESIYWS PLPFPVLLTM DVSNCPKLRK LPLNATSVSK 540
541 VEEFEIHMYP PPEQENELEW EDDDTKNRFL PSIKPYKYFV YPGMSFLTV
|
| Detection Method: | |
| Confidence: | 17.09691 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
