| Protein: | DCL1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1909 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for DCL1_ARATH.
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Region A: Residues: [1-166] |
1 11 21 31 41 51
| | | | | |
1 MVMEDEPREA TIKPSYWLDA CEDISCDLID DLVSEFDPSS VAVNESTDEN GVINDFFGGI 60
61 DHILDSIKNG GGLPNNGVSD TNSQINEVTV TPQVIAKETV KENGLQKNGG KRDEFSKEEG 120
121 DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [167-225] |
1 11 21 31 41 51
| | | | | |
1 GNNKKKRECN NYRRDGRDRE VRGYWERDKV GSNELVYRSG TWEADHERDV KKVSGGNRE
|
| Detection Method: | |
| Confidence: | 27.154902 |
| Match: | 2eyqA |
| Description: | Crystal structure of Escherichia coli transcription-repair coupling factor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [226-868] |
1 11 21 31 41 51
| | | | | |
1 CDVKAEENKS KPEERKEKVV EEQARRYQLD VLEQAKAKNT IAFLETGAGK TLIAILLIKS 60
61 VHKDLMSQNR KMLSVFLVPK VPLVYQQAEV IRNQTCFQVG HYCGEMGQDF WDSRRWQREF 120
121 ESKQVLVMTA QILLNILRHS IIRMETIDLL ILDECHHAVK KHPYSLVMSE FYHTTPKDKR 180
181 PAIFGMTASP VNLKGVSSQV DCAIKIRNLE TKLDSTVCTI KDRKELEKHV PMPSEIVVEY 240
241 DKAATMWSLH ETIKQMIAAV EEAAQASSRK SKWQFMGARD AGAKDELRQV YGVSERTESD 300
301 GAANLIHKLR AINYTLAELG QWCAYKVGQS FLSALQSDER VNFQVDVKFQ ESYLSEVVSL 360
361 LQCELLEGAA AEKVAAEVGK PENGNAHDEM EEGELPDDPV VSGGEHVDEV IGAAVADGKV 420
421 TPKVQSLIKL LLKYQHTADF RAIVFVERVV AALVLPKVFA ELPSLSFIRC ASMIGHNNSQ 480
481 EMKSSQMQDT ISKFRDGHVT LLVATSVAEE GLDIRQCNVV MRFDLAKTVL AYIQSRGRAR 540
541 KPGSDYILMV ERGNVSHAAF LRNARNSEET LRKEAIERTD LSHLKDTSRL ISIDAVPGTV 600
601 YKVEATGAMV SLNSAVGLVH FYCSQLPGDR YAILRPEFSM EKH
|
| Detection Method: | |
| Confidence: | 91.30103 |
| Match: | 2fdcA |
| Description: | No description for 2fdcA was found. |
|
Region A: Residues: [869-1080] |
1 11 21 31 41 51
| | | | | |
1 EKPGGHTEYS CRLQLPCNAP FEILEGPVCS SMRLAQQAVC LAACKKLHEM GAFTDMLLPD 60
61 KGSGQDAEKA DQDDEGEPVP GTARHREFYP EGVADVLKGE WVSSGKEVCE SSKLFHLYMY 120
121 NVRCVDFGSS KDPFLSEVSE FAILFGNELD AEVLSMSMDL YVARAMITKA SLAFKGSLDI 180
181 TENQLSSLKK FHVRLMSIVL DVDVEPSTTP WD
|
| Detection Method: | |
| Confidence: | 5.221849 |
| Match: | 1tf2A |
| Description: | Crystal structure of SecA:ADP in an open conformation from Bacillus Subtilis |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1081-1334] |
1 11 21 31 41 51
| | | | | |
1 PAKAYLFVPV TDNTSMEPIK GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR 60
61 REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM 120
121 MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK 180
181 QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV LDKTYYVFLP PELCVVHPLS 240
241 GSLIRGAQRL PSIM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1335-1567] |
1 11 21 31 41 51
| | | | | |
1 RRVESMLLAV QLKNLISYPI PTSKILEALT AASCQETFCY ERAELLGDAY LKWVVSRFLF 60
61 LKYPQKHEGQ LTRMRQQMVS NMVLYQFALV KGLQSYIQAD RFAPSRWSAP GVPPVFDEDT 120
121 KDGGSSFFDE EQKPVSEENS DVFEDGEMED GELEGDLSSY RVLSSKTLAD VVEALIGVYY 180
181 VEGGKIAANH LMKWIGIHVE DDPDEVDGTL KNVNVPESVL KSIDFVGLER ALK
|
| Detection Method: | |
| Confidence: | 52.0 |
| Match: | 2a11A |
| Description: | Crystal Structure of Nuclease Domain of Ribonuclase III from Mycobacterium Tuberculosis |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1568-1796] |
1 11 21 31 41 51
| | | | | |
1 YEFKEKGLLV EAITHASRPS SGVSCYQRLE FVGDAVLDHL ITRHLFFTYT SLPPGRLTDL 60
61 RAAAVNNENF ARVAVKHKLH LYLRHGSSAL EKQIREFVKE VQTESSKPGF NSFGLGDCKA 120
121 PKVLGDIVES IAGAIFLDSG KDTTAAWKVF QPLLQPMVTP ETLPMHPVRE LQERCQQQAE 180
181 GLEYKASRSG NTATVEVFID GVQVGVAQNP QKKMAQKLAA RNALAALKE
|
| Detection Method: | |
| Confidence: | 61.30103 |
| Match: | 3c4bA |
| Description: | No description for 3c4bA was found. |
|
Region A: Residues: [1797-1909] |
1 11 21 31 41 51
| | | | | |
1 KEIAESKEKH INNGNAGEDQ GENENGNKKN GHQPFTRQTL NDICLRKNWP MPSYRCVKEG 60
61 GPAHAKRFTF GVRVNTSDRG WTDECIGEPM PSVKKAKDSA AVLLLELLNK TFS
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 2yt4A |
| Description: | No description for 2yt4A was found. |
