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View Structure Prediction Details

Protein: SDHA1_ARATH
Organism: Arabidopsis thaliana
Length: 634 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SDHA1_ARATH.

Description E-value Query
Range
Subject
Range
gi|49068996, gi|... - gi|71005306|ref|XP_757319.1| hypothetical protein UM01172.1 [Ustilago maydis 521], ref|XP_398787.1| ...
571.0 [0..3] [634..14]

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Predicted Domain #1
Region A:
Residues: [1-634]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRCVSRGFR APASKTSSLF DGVSGSRFSR FFSTGSTDTR SSYTIVDHTY DAVVVGAGGA  60
   61 GLRAAIGLSE HGFNTACITK LFPTRSHTVA AQGGINAALG NMSEDDWRWH MYDTVKGSDW 120
  121 LGDQDAIQYM CREAPKAVIE LENYGLPFSR TEEGKIYQRA FGGQSLDFGK GGQAYRCACA 180
  181 ADRTGHALLH TLYGQAMKHN TQFFVEYFAL DLLMASDGSC QGVIALNMED GTLHRFRSSQ 240
  241 TILATGGYGR AYFSATSAHT CTGDGNAMVA RAGLPLQDLE FVQFHPTGIY GAGCLITEGS 300
  301 RGEGGILRNS EGERFMERYA PTAKDLASRD VVSRSMTMEI REGRGVGPHK DHIYLHLNHL 360
  361 PPEVLKERLP GISETAAIFA GVDVTKEPIP VLPTVHYNMG GIPTNYHGEV VTIKGDDPDA 420
  421 VIPGLMAAGE AACASVHGAN RLGANSLLDI VVFGRACANR VAEISKPGEK QKPLEKDAGE 480
  481 KTIAWLDRLR NSNGSLPTST IRLNMQRIMQ NNAAVFRTQE TLEEGCQLID KAWESFGDVQ 540
  541 VKDRSMIWNS DLIETLELEN LLINASITMH SAEARKESRG AHAREDFTKR EDGEWMKHTL 600
  601 GYWEDEKVRL DYRPVHMDTL DDEIDTFPPK ARVY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 149.0
Match: 1zoyA
Description: Crystal Structure of Mitochondrial Respiratory Complex II from porcine heart at 2.4 Angstroms
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle