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View Structure Prediction Details

Protein: CYSK4_ARATH
Organism: Arabidopsis thaliana
Length: 404 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYSK4_ARATH.

Description E-value Query
Range
Subject
Range
gi|15825697, gi|... - gi|15825701|pdb|1JBQ|F Chain F, Structure Of Human Cystathionine Beta-Synthase: A Unique Pyridoxal 5...
367.0 [0..7] [403..2]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFASPSLRL LPQSPLGRIT SKLHRFSTAK LSLFSFHHDS SSSLAVRTPV SSFVVGAISG  60
   61 KSSTGTKSKS KTKRKPPPPP PVTTVAEEQH IAESET

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.0
Match: 1kl7A
Description: Threonine synthase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [97-404]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNIAEDVTQL IGSTPMVYLN RVTDGCLADI AAKLESMEPC RSVKDRIGLS MINEAENSGA  60
   61 ITPRKTVLVE PTTGNTGLGI AFVAAAKGYK LIVTMPASIN IERRMLLRAL GAEIVLTNPE 120
  121 KGLKGAVDKA KEIVLKTKNA YMFQQFDNTA NTKIHFETTG PEIWEDTMGN VDIFVAGIGT 180
  181 GGTVTGTGGF LKMMNKDIKV VGVEPSERSV ISGDNPGYLP GILDVKLLDE VFKVSNGEAI 240
  241 EMARRLALEE GLLVGISSGA AAVAAVSLAK RAENAGKLIT VLFPSHGERY ITTALFSSIN 300
  301 REVQEMRY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.69897
Match: 2isqA
Description: No description for 2isqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle