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View Structure Prediction Details

Protein: COL2_ARATH
Organism: Arabidopsis thaliana
Length: 347 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COL2_ARATH.

Description E-value Query
Range
Subject
Range
gi|41323976 - gi|41323976|gb|AAS00054.1| CONSTANS-like protein CO1 [Populus deltoides]
264.0 [0..1] [347..51]

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Predicted Domain #1
Region A:
Residues: [1-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKEESNESG TWARACDTCR SAACTVYCEA DSAYLCTTCD ARVHAANRVA SRHERVRVCQ  60
   61 SCESAPAAFL CKADAASLCT ACDAEIHSAN PLARRHQRVP ILPLSANSCS SMAPSETDAD 120
  121 NDEDDREVAS WLLPNPGKNI GNQNNGFLFG VEYLDLVDYS SSMDNQFEDN QYTHYQRSFG 180
  181 GDGVVPLQVE ESTSHLQQSQ QNFQLGINYG FSSGAHYNNN SLKDLNHSAS VSSMDISVVP 240
  241 ESTASDITVQ HPRTTKETID QLSGPPTQVV QQLTPMEREA RVLRYREKKK TRKFDKTIRY 300
  301 ASRKAYAEIR PRIKGRFAKR IETEAEAEEI FSTSLMSETG YGIVPSF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.962
Match: 2j7aA
Description: No description for 2j7aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle