| Protein: | CNGC5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 717 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNGC5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
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431.0 | [0..1] | [717..1] |
|
|
382.0 | [0..1] | [717..12] |
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375.0 | [0..1] | [717..1] |
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372.0 | [0..1] | [717..11] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MAGKRENFVR VDDLDSRLPS SSVAFQQNYA SNFSGQLHPI HASNETSRSF KKGIQKGSKG 60
61 LKSIGRSLGF GVYRAVFPED
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [81-214] |
1 11 21 31 41 51
| | | | | |
1 LKVSEKKIFD PQDKFLLYCN KLFVASCILS VFVDPFFFYL PVINAESKCL GIDRKLAITA 60
61 STLRTFIDVF YLAHMALQLR TAYIAPSSRV FGRGELVIDP AQIAKRYLQR WFIIDFLSVL 120
121 PLPQIVVWRF LQSS
|
| Detection Method: | |
| Confidence: | 1.41 |
| Match: | 2a0lA |
| Description: | Crystal structure of KvAP-33H1 Fv complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [215-444] |
1 11 21 31 41 51
| | | | | |
1 NGSDVLATKQ ALLFIVLVQY IPRFLRVLPL TSELKRTAGV FAETAWAGAA YYLLLYMLAS 60
61 HIVGAFWYLL ALERNDACWQ EACIDAGNCS TDFLYCGNQN MDGYAVWNRA KESVLKSKCR 120
121 ADLDDNNPPF DFGIYTQALS SGIVSSQNFI VKYCYCLWWG LQNLSTLGQG LETSTYPMEI 180
181 IFSISLAISG LILFALLIGN MQTYLQSLTI RLEEMRVKRR DSEQWMHHRM
|
| Detection Method: | |
| Confidence: | 7.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
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|
Region A: Residues: [445-500] |
1 11 21 31 41 51
| | | | | |
1 LPQDLRERVR RYDQYKWLET RGVDEEYLVQ NLPKDLRRDI KRHLCLALVR RVPLFK
|
| Detection Method: | |
| Confidence: | 2.07 |
| Match: | 2ptmA |
| Description: | No description for 2ptmA was found. |
|
Region A: Residues: [501-629] |
1 11 21 31 41 51
| | | | | |
1 SMDDKLLDAI CMRLKPCLFT ESTYLVREGD PVDEMLFIIR GRLESVTTDG GRSGFFNRSL 60
61 LKEGEFCGEE LLTWALDPKS GVNLPSSTRT VKALTEVEAF ALTSEELKFV ASQFRRLHSR 120
121 QVQHTFRFY
|
| Detection Method: | |
| Confidence: | 17.0 |
| Match: | 1wgpA |
| Description: | Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [630-717] |
1 11 21 31 41 51
| | | | | |
1 SHQWRTWAAC FIQAAWRRYC KRKKMEEAEA EAAAVSSSTA GPSYSIGAAF LATKFAANAL 60
61 RTIHRNRNTK IRDLVKLQKP PEPDFTAD
|
| Detection Method: | |
| Confidence: | 27.0 |
| Match: | 1i5zA |
| Description: | Catabolite gene activator protein (CAP), C-terminal domain; Catabolite gene activator protein, N-terminal domain |
Matching Structure (courtesy of the PDB): |
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