| Protein: | CNGC1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 716 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNGC1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
366.0 | [0..1] | [716..1] |
|
|
350.0 | [0..1] | [715..1] |
|
|
332.0 | [0..1] | [716..12] |
|
|
327.0 | [0..4] | [716..3] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MNFRQEKFVR FQDWKSDKTS SDVEYSGKNE IQTGIFQRTI SSISDKFYRS FESSSARIKL 60
61 FKRSYKSYSF KEAVSKGIGS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.864 | d.52.9 | Description not found. |
| View | Download | 0.757 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.757 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.688 | d.52.8 | Description not found. |
| View | Download | 0.664 | d.52.9 | Description not found. |
| View | Download | 0.544 | d.266.1 | Description not found. |
| View | Download | 0.529 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.517 | a.2.3 | Chaperone J-domain |
| View | Download | 0.484 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.462 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.374 | a.231.1 | Description not found. |
| View | Download | 0.358 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.350 | a.7.8 | GAT domain |
| View | Download | 0.338 | d.253.1 | Description not found. |
|
Region A: Residues: [81-208] |
1 11 21 31 41 51
| | | | | |
1 THKILDPQGP FLQRWNKIFV LACIIAVSLD PLFFYVPIID DAKKCLGIDK KMEITASVLR 60
61 SFTDVFYVLH IIFQFRTGFI APSSRVFGRG VLVEDKREIA KRYLSSHFII DILAVLPLPQ 120
121 MVILIIIP
|
| Detection Method: | |
| Confidence: | 1.53 |
| Match: | 2a0lA |
| Description: | Crystal structure of KvAP-33H1 Fv complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [209-416] |
1 11 21 31 41 51
| | | | | |
1 HMRGSSSLNT KNMLKFIVFF QYIPRFIRIY PLYKEVTRTS GILTETAWAG AAFNLFLYML 60
61 ASHVFGAFWY LFSIERETVC WKQACERNNP PCISKLLYCD PETAGGNAFL NESCPIQTPN 120
121 TTLFDFGIFL DALQSGVVES QDFPQKFFYC FWWGLQNLSS LGQNLKTSTY IWEICFAVFI 180
181 SIAGLVLFSF LIGNMQTYLQ STTTRLEE
|
| Detection Method: | |
| Confidence: | 14.30103 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [417-489] |
1 11 21 31 41 51
| | | | | |
1 MRVKRRDAEQ WMSHRLLPEN LRKRIRRYEQ YKWQETRGVD EENLLSNLPK DLRRDIKRHL 60
61 CLALLMRVPM FEK
|
| Detection Method: | |
| Confidence: | 2.68 |
| Match: | 2ptmA |
| Description: | No description for 2ptmA was found. |
|
Region A: Residues: [490-622] |
1 11 21 31 41 51
| | | | | |
1 MDEQLLDALC DRLQPVLYTE ESYIVREGDP VDEMLFIMRG KLLTITTNGG RTGFLNSEYL 60
61 GAGDFCGEEL LTWALDPHSS SNLPISTRTV RALMEVEAFA LKADDLKFVA SQFRRLHSKQ 120
121 LRHTFRYYSQ QWK
|
| Detection Method: | |
| Confidence: | 16.045757 |
| Match: | 1wgpA |
| Description: | Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [623-716] |
1 11 21 31 41 51
| | | | | |
1 TWAACFIQAA WRRYIKKKLE ESLKEEENRL QDALAKEACG SSPSLGATIY ASRFAANILR 60
61 TIRRSGSVRK PRMPERMPPM LLQKPAEPDF NSDD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.630 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.630 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.630 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.626 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.619 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.597 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.597 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.591 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.586 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.528 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
