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View Structure Prediction Details

Protein: CLH1_ARATH
Organism: Arabidopsis thaliana
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLH1_ARATH.

Description E-value Query
Range
Subject
Range
gi|24210533 - gi|24210533|gb|AAN51933.1|AF337544_1 chlorophyllase 1 [Brassica oleracea]
193.0 [0..1] [324..1]

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Predicted Domain #1
Region A:
Residues: [1-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAIEDSPTF SSVVTPAAFE IGSLPTTEIP VDPVENDSTA PPKPVRITCP TVAGTYPVVL  60
   61 FFHGFYLRNY FYSDVLNHIA SHGYILVAPQ LCKLLPPGGQ VEVDDAGSVI NWASENLKAH 120
  121 LPTSVNANGK YTSLVGHSRG GKTAFAVALG HAATLDPSIT FSALIGIDPV AGTNKYIRTD 180
  181 PHILTYKPES FELDIPVAVV GTGLGPKWNN VMPPCAPTDL NHEEFYKECK ATKAHFVAAD 240
  241 YGHMDMLDDD LPGFVGFMAG CMCKNGQRKK SEMRSFVGGI VVAFLKYSLW GEKAEIRLIV 300
  301 KDPSVSPAKL DPSPELEEAS GIFV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.09691
Match: 1s8oA
Description: Human soluble Epoxide Hydrolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle