| Protein: | CLF_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 902 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLF_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
777.0 | [0..1] | [902..1] |
|
Region A: Residues: [1-214] |
1 11 21 31 41 51
| | | | | |
1 MASEASPSSS ATRSEPPKDS PAEERGPASK EVSEVIESLK KKLAADRCIS IKKRIDENKK 60
61 NLFAITQSFM RSSMERGGSC KDGSDLLVKR QRDSPGMKSG IDESNNNRYV EDGPASSGMV 120
121 QGSSVPVKIS LRPIKMPDIK RLSPYTTWVF LDRNQRMTED QSVVGRRRIY YDQTGGEALI 180
181 CSDSEEEAID DEEEKRDFLE PEDYIIRMTL EQLG
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [215-289] |
1 11 21 31 41 51
| | | | | |
1 LSDSVLAELA SFLSRSTSEI KARHGVLMKE KEVSESGDNQ AESSLLNKDM EGALDSFDNL 60
61 FCRRCLVFDC RLHGC
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.678 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.623 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.576 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.573 | a.77.1 | DEATH domain |
| View | Download | 0.559 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
|
Region A: Residues: [290-445] |
1 11 21 31 41 51
| | | | | |
1 SQDLIFPAEK PAPWCPPVDE NLTCGANCYK TLLKSGRFPG YGTIEGKTGT SSDGAGTKTT 60
61 PTKFSSKLNG RKPKTFPSES ASSNEKCALE TSDSENGLQQ DTNSDKVSSS PKVKGSGRRV 120
121 GRKRNKNRVA ERVPRKTQKR QKKTEASDSD SIASGS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [446-550] |
1 11 21 31 41 51
| | | | | |
1 CSPSDAKHKD NEDATSSSQK HVKSGNSGKS RKNGTPAEVS NNSVKDDVPV CQSNEVASEL 60
61 DAPGSDESLR KEEFMGETVS RGRLATNKLW RPLEKSLFDK GVEIF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [551-902] |
1 11 21 31 41 51
| | | | | |
1 GMNSCLIARN LLSGFKSCWE VFQYMTCSEN KASFFGGDGL NPDGSSKFDI NGNMVNNQVR 60
61 RRSRFLRRRG KVRRLKYTWK SAAYHSIRKR ITEKKDQPCR QFNPCNCKIA CGKECPCLLN 120
121 GTCCEKYCGC PKSCKNRFRG CHCAKSQCRS RQCPCFAADR ECDPDVCRNC WVIGGDGSLG 180
181 VPSQRGDNYE CRNMKLLLKQ QQRVLLGISD VSGWGAFLKN SVSKHEYLGE YTGELISHKE 240
241 ADKRGKIYDR ENCSFLFNLN DQFVLDAYRK GDKLKFANHS PEPNCYAKVI MVAGDHRVGI 300
301 FAKERILAGE ELFYDYRYEP DRAPAWAKKP EAPGSKKDEN VTPSVGRPKK LA
|
| Detection Method: | |
| Confidence: | 56.69897 |
| Match: | 2r3aA |
| Description: | No description for 2r3aA was found. |
