| Protein: | CNG14_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 726 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNG14_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
410.0 | [0..37] | [726..1] |
|
|
367.0 | [0..1] | [726..1] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MEFKRDNTVR FYGDEKQTIE VGEKRVPLFK STTAPFMKQE VLPKKSKTRL KIPRFGRFKV 60
61 FPENFEIERD KILDP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.450 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.443 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.434 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.434 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.404 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.399 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.350 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.350 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.343 | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
|
Region A: Residues: [76-198] |
1 11 21 31 41 51
| | | | | |
1 GGDAVLQWNR VFLFWCLVAL YVDPLFFFLS SVKRIGRSSC MTTDLKLGIV ITFFRTLADL 60
61 FYVLHIVIKF RTAYVSRTSR VFGRGELVKD PKLIARRYLR SDFIVDLIAC LPLPQIVSWF 120
121 ILP
|
| Detection Method: | |
| Confidence: | 1.52 |
| Match: | 2a0lA |
| Description: | Crystal structure of KvAP-33H1 Fv complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [199-419] |
1 11 21 31 41 51
| | | | | |
1 SIRSSHSDHT TNALVLIVLV QYIPRLYLIF PLSAEIIKAT GVVTTTAWAG AAYNLLQYML 60
61 ASHILGSAWY LLSIERQATC WKAECHKESV PLQCVTDFFD CGTLHRDDRN NWQNTTVVFS 120
121 NCDPSNNIQF TFGIFADALT KNVVSSPFLE KYLYCLWFGL QNLSSYGQNL STSTSVLETM 180
181 FAILVAIFGL VLFALLIGNM QTYLQSITVR LEEWRLKRRD T
|
| Detection Method: | |
| Confidence: | 5.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [420-484] |
1 11 21 31 41 51
| | | | | |
1 EEWMGHRLLP QNLRERVRRF VQYKWLATRG VDEETILHSL PADLRRDIQR HLCLDLVRRV 60
61 PLFAQ
|
| Detection Method: | |
| Confidence: | 26.154902 |
| Match: | 2q0aA |
| Description: | No description for 2q0aA was found. |
|
Region A: Residues: [485-623] |
1 11 21 31 41 51
| | | | | |
1 MDDQLLDAIC ERLASSLSTQ GNYIVREGDP VTEMLFIIRG KLESSTTNGG RTGFFNSITL 60
61 RPGDFCGEEL LAWALLPKST VNLPSSTRTV RALEEVEAFA LQAGDLKFVA NQFRRLHSKK 120
121 LQHTFRYYSH QWRTWAACF
|
| Detection Method: | |
| Confidence: | 18.69897 |
| Match: | 1wgpA |
| Description: | Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [624-726] |
1 11 21 31 41 51
| | | | | |
1 VQVAWRRYKR KKLAKSLSLA ESFSSYDEEE AVAVAATEEM SHEGEAQSGA KARHHTSNVK 60
61 PHFAATILAS RFAKNTRRTA HKLKDVEIPM LPKPDEPDFS VDD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.694 | a.29.13 | Description not found. |
| View | Download | 0.588 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.493 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.460 | a.24.28 | Description not found. |
| View | Download | 0.432 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.432 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.406 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.396 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
