| Protein: | COBL9_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 663 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COBL9_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
955.0 | [0..44] | [642..45] |
|
|
918.0 | [0..35] | [644..29] |
|
|
914.0 | [0..45] | [663..40] |
|
|
909.0 | [0..45] | [642..43] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MGVLLPIFFG VLLLFTVTPP SMSQLPPTIM VPAPAPAPIS PSDLCNGIFL SYDFILGRKI 60
61 PPNDTADQPY RFESVLTVLN NGREELKEWR VFVGFQHNEI LISATDALIV NGTELPALVG 120
121 NGTIFGGYPV SDLKTAIQTA GDLKQMTAEI ELVGTQFMVA PPAVPLPSNI SLVNEGWLCP 180
181 VPTLQSKREL TTCCIRDASI IVN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [204-447] |
1 11 21 31 41 51
| | | | | |
1 TTITTKFLPR QPGDLTIMYD VIRAYDQNYL TEVTMENHNP LGRLDHWELS FDWMRDEFIQ 60
61 KMQGAYPTVV DATKCIFGPQ SLIYTGLDFA DVLTCERRPI IIDLPPTKKD DSTLGNIPSC 120
121 CRNGTILPRI MDPSKSVSVF TMQVAKMPPD FNRSALFPPQ NWRIKGTLNP DYSCGPPVRV 180
181 TPTFYPDPSG MPTNKSSFAS WQIVCNITQA KTEIPKCCVS FSAFFNDSII PCNTCACGCV 240
241 SETR
|
| Detection Method: | |
| Confidence: | 133.481486 |
| Match: | PF04833.6 |
| Description: | No description for PF04833.6 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [448-528] |
1 11 21 31 41 51
| | | | | |
1 RTCSAETPSL LIPPDALLLP FENRTALTLA WNALKHKTLP NPMPCGDNCG VSINWHMASD 60
61 YRGGWTVRIT IFNWGEIDFP N
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.580 | a.48.4 | Description not found. |
| View | Download | 0.510 | a.64.1 | Saposin |
| View | Download | 0.444 | b.1.18 | E set domains |
| View | Download | 0.421 | d.24.1 | Pili subunits |
| View | Download | 0.414 | b.1.18 | E set domains |
| View | Download | 0.396 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.395 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.353 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.324 | b.1.1 | Immunoglobulin |
| View | Download | 0.313 | a.56.1 | CO dehydrogenase ISP C-domain like |
|
Region A: Residues: [529-663] |
1 11 21 31 41 51
| | | | | |
1 WFLAVQMKKP ALLGFEKAYS FNASLLSVDG GVNNTIFMEG LPGLDYLVAE ADEKDPKKKN 60
61 IRIPGKQQSV IQFSKKLTPG INVAERDGFP AKVIFNGEEC LLPDLLPMAS GGRRNGAITV 120
121 LSFITFYVAA FMVLL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.259 | N/A | N/A | b.55.1 | PH domain-like |
