| Protein: | COBL4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 431 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COBL4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
739.0 | [0..12] | [425..28] |
|
|
731.0 | [0..5] | [428..13] |
|
|
731.0 | [0..1] | [430..1] |
|
|
729.0 | [0..13] | [425..23] |
|
|
727.0 | [0..3] | [431..11] |
|
Region A: Residues: [1-208] |
1 11 21 31 41 51
| | | | | |
1 MRLLFSFCFF FFMIIFTATA YDPLDPSGNI TIKWDIMSWT ADGYVATVTM NNFQIYRHIQ 60
61 NPGWTLGWTW AKKEVIWSMV GAQTTEQGDC SKFKGNVPHC CKKTPTVVDL LPGVPYNQQF 120
121 SNCCKGGVIG AWGQDPSAAV SQFQVSAGLA GTTNKTVKLP KNFTLLGPGP GYTCGPAKIV 180
181 PSTVFLTTDK RRKTQALMTW NVTCTYSQ
|
| Detection Method: |  |
| Confidence: | 111.0 |
| Match: | PF04833.6 |
| Description: | No description for PF04833.6 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [209-303] |
1 11 21 31 41 51
| | | | | |
1 FLARKHPSCC VSFSSFYNDT ITPCPSCACG CENKKSCVKA DSKILTKKGL NTPKKDNTPL 60
61 LQCTHHMCPV RVHWHVKTNY KDYWRVKIAI TNFNY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.318 | b.1.2 | Fibronectin type III |
| View | Download | 0.270 | b.1.2 | Fibronectin type III |
| View | Download | 0.270 | b.1.2 | Fibronectin type III |
| View | Download | 0.253 | b.1.2 | Fibronectin type III |
| View | Download | 0.240 | b.24.1 | Hyaluronate lyase-like, C-terminal domain |
| View | Download | 0.240 | b.24.1 | Hyaluronate lyase-like, C-terminal domain |
| View | Download | 0.212 | a.134.1 | Fungal elicitin |
|
Region A: Residues: [304-431] |
1 11 21 31 41 51
| | | | | |
1 RMNHTLWTLA IQHPNLNNVT QVFSFDYKPV SPYGSINDTG MFYGTKFYND LLMEAGPSGN 60
61 VQSEVLLQKD QKTFTFKQGW AFPRKVYFNG DECMLPPPDS YPFLPNSAQG NFASFSLTIL 120
121 LLLFISIW
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.612 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.541 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.524 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.524 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.521 | N/A | N/A | d.17.4 | NTF2-like |
| View | Download | 0.503 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.461 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.461 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.424 | N/A | N/A | d.74.4 | Prokaryotic AspRS, insert domain |
