| Protein: | COBL1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 452 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COBL1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
772.0 | [0..1] | [439..1] |
|
|
756.0 | [0..17] | [448..13] |
|
|
755.0 | [0..25] | [447..28] |
|
|
747.0 | [0..11] | [448..4] |
|
|
740.0 | [0..26] | [442..23] |
|
Region A: Residues: [1-250] |
1 11 21 31 41 51
| | | | | |
1 MGFFLCSSSS IFFKFGISII FLVSFSGLTP SEAYDPLDPS GNITVKWDII TWTGDGYVAT 60
61 VTVYNFQQYR HIQAPGWTLG WSWAKREVIW GMNGGQTTEQ GDCSKFKGTI PHCCKKTPSV 120
121 VDLLPGSPYN QQIANCCRGG VLNSWAQDPA TAVSAFQLTV GQAGTTNKTV RVPKNFTLKA 180
181 PGPGYTCSPA KIVKPTRFIG TDKRRVTQAL MTWNVTCTYS QFLAQKTPTC CVSLSSFYNK 240
241 TIVSCPTCSC
|
| Detection Method: |  |
| Confidence: | 111.769551 |
| Match: | PF04833.6 |
| Description: | No description for PF04833.6 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [251-323] |
1 11 21 31 41 51
| | | | | |
1 GCRNTSQPGN CVDPKGPRIA SVIPNPGKNA YIPPLVQCTK HMCPVRIHWH VKVNYKQYWR 60
61 VKVTITNFNY NMN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.773 | g.79.1 | Description not found. |
| View | Download | 0.772 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.772 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.766 | d.24.1 | Pili subunits |
| View | Download | 0.750 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.737 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.737 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.692 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.683 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.653 | g.18.1 | Complement control module/SCR domain |
|
Region A: Residues: [324-452] |
1 11 21 31 41 51
| | | | | |
1 YSQWNLVVQH PNFDNLTQTF SFNYKPLTPY ASINDTGILW GIKFYNDLLM QAGPFGNVQS 60
61 ELLFQKEASA FTFEKGWAFP RRIYFNGDNC VMPPPDSYPW LPNTGSHKSV GSLFAAMALL 120
121 LIVFLHGNL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.666 | N/A | N/A | d.352.1 | Description not found. |
| View | Download | 0.556 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.536 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.494 | N/A | N/A | d.74.4 | Prokaryotic AspRS, insert domain |
| View | Download | 0.491 | N/A | N/A | d.41.4 | Ribosomal protein L10e |
| View | Download | 0.459 | N/A | N/A | d.74.4 | Prokaryotic AspRS, insert domain |
| View | Download | 0.459 | N/A | N/A | d.74.4 | Prokaryotic AspRS, insert domain |
| View | Download | 0.444 | N/A | N/A | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.407 | N/A | N/A | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
