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View Structure Prediction Details

Protein: CATA3_ARATH
Organism: Arabidopsis thaliana
Length: 492 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CATA3_ARATH.

Description E-value Query
Range
Subject
Range
gi|118489019 - gi|118489019|gb|ABK96317.1| unknown [Populus trichocarpa x Populus deltoides]
gi|90818816 - gi|90818816|emb|CAI43948.1| catalase [Populus deltoides]
680.0 [0..1] [492..1]

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Predicted Domain #1
Region A:
Residues: [1-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPYKYRPSS AYNAPFYTTN GGAPVSNNIS SLTIGERGPV LLEDYHLIEK VANFTRERIP  60
   61 ERVVHARGIS AKGFFEVTHD ISNLTCADFL RAPGVQTPVI VRFSTVVHER ASPETMRDIR 120
  121 GFAVKFYTRE GNFDLVGNNT PVFFIRDGIQ FPDVVHALKP NPKTNIQEYW RILDYMSHLP 180
  181 ESLLTWCWMF DDVGIPQDYR HMEGFGVHTY TLIAKSGKVL FVKFHWKPTC GIKNLTDEEA 240
  241 KVVGGANHSH ATKDLHDAIA SGNYPEWKLF IQTMDPADED KFDFDPLDVT KIWPEDILPL 300
  301 QPVGRLVLNR TIDNFFNETE QLAFNPGLVV PGIYYSDDKL LQCRIFAYGD TQRHRLGPNY 360
  361 LQLPVNAPKC AHHNNHHEGF MNFMHRDEEI NYYPSKFDPV RCAEKVPTPT NSYTGIRTKC 420
  421 VIKKENNFKQ AGDRYRSWAP DRQDRFVKRW VEILSEPRLT HEIRGIWISY WSQADRSLGQ 480
  481 KLASRLNVRP SI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1tguA
Description: The crystal structure of bovine liver catalase without NADPH
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalase activity 8.51144125131094 bayes_pls_golite062009
peroxidase activity 6.21360523181668 bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor 6.21360523181668 bayes_pls_golite062009
antioxidant activity 6.04714571701065 bayes_pls_golite062009
oxidoreductase activity 3.44196562388719 bayes_pls_golite062009
catalytic activity 2.21594208202467 bayes_pls_golite062009
binding 1.36094821927052 bayes_pls_golite062009
protein binding 0.410297807559574 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle