| Protein: | CAP7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 591 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAP7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
469.0 | [0..1] | [585..1] |
|
Region A: Residues: [1-328] |
1 11 21 31 41 51
| | | | | |
1 MGTFTSFRKA YGALKDTTTV GLAKVNSEFK DLDIAIVKAT NHVESPPKER HVRKIFSATS 60
61 VIQPRADVAY CIHALSKRLS KTRNWVVAMK VLIVIHRTLR EGDPTFREEL LNYSHRRHIL 120
121 RISNFKDDTS PLAWDCSAWV RTYALFLEER LECYRVLKYD IEAERLPKAS GAASKTHRTR 180
181 MLSGEDLLEQ LPALQQLLYR LIGCQPEGAA YSNYLIQYAL ALVLKESFKI YCAINDGIIN 240
241 LVDMFFEMSR HDAVKALNIY KRAGQQAENL AEFYDYCKGL ELARNFQFPT LRQPPPSFLA 300
301 TMEEYIKEAP QSGSVQKKLE YQEKEEEE
|
| Detection Method: |  |
| Confidence: | 89.69897 |
| Match: | 1hf8A |
| Description: | Clathrin assembly lymphoid myeloid leukaemia protein, Calm |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.229007340928547 | bayes_pls_golite062009 |
|
Region A: Residues: [329-428] |
1 11 21 31 41 51
| | | | | |
1 QEQEEEQPEE PAEEENQNEN TENDQPLIEE EEEEPKEEIE VEEAKPSPLI DTDDLLGLHE 60
61 INPKAAEIEQ NNAFSLAIYP PGHETSAPSN SLSLIEAGGS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [429-591] |
1 11 21 31 41 51
| | | | | |
1 GWELALVTPQ NNNNNNNNPR PVIATKLGGG FDNLLLDSLY EDDTARRQIQ LTNAGYGFGA 60
61 TAIPGALASS NPNPFGVQQD PFAMSNNMAP PTNVQMAMQQ QQMMMMNNQS PYNNNYSPYH 120
121 HHQFSPNPST SSSPNPFGDP FLALPAPPSS TTQQQYSPNH MLL
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
