| Protein: | CAP4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 599 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAP4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
399.0 | [0..1] | [599..1] |
|
Region A: Residues: [1-327] |
1 11 21 31 41 51
| | | | | |
1 MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL 60
61 TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG EGDQAYEQEI FFATRRGTRL 120
121 LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA 180
181 AADLSTAIVV RSQPIAEMKT EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV 240
241 KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR 300
301 SSEYPEIEKI TQKKLDLMDE FIRDKSA
|
| Detection Method: |  |
| Confidence: | 88.0 |
| Match: | 1hf8A |
| Description: | Clathrin assembly lymphoid myeloid leukaemia protein, Calm |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.229007340928547 | bayes_pls_golite062009 |
|
Region A: Residues: [328-440] |
1 11 21 31 41 51
| | | | | |
1 LEHTKQSKSV KSEADEDDDE ARTEEVNEEQ EDMNAIKALP EPPPKEEDDV KPEEEAKEEV 60
61 IIEKKQEEMG DLLDLGNTNG GEAGQAGDSL ALALFDGPYA SGSGSESGPG WEA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [441-599] |
1 11 21 31 41 51
| | | | | |
1 FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA 60
61 SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK 120
121 QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY
|
| Detection Method: | |
| Confidence: | 6.30103 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
