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View Structure Prediction Details

Protein: CAMT4_ARATH
Organism: Arabidopsis thaliana
Length: 259 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAMT4_ARATH.

Description E-value Query
Range
Subject
Range
CAMT_MESCR - Caffeoyl-CoA O-methyltransferase OS=Mesembryanthemum crystallinum PE=2 SV=1
214.0 [0..1] [259..1]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTTTEATK TSSTNGEDQK QSQNLRHQEV GHKSLLQSDD LYQYILETSV YPREPESMKE  60
   61 LREVTAKHPW NIMTTSADEG QFLNMLIKLV NAKNTMEIGV YTGYSLLATA LALPEDGKIL 120
  121 AMDVNRENYE LGLPIIEKAG VAHKIDFREG PALPVLDEIV ADEKNHGTYD FIFVDADKDN 180
  181 YINYHKRLID LVKIGGVIGY DNTLWNGSVV APPDAPMRKY VRYYRDFVLE LNKALAADPR 240
  241 IEICMLPVGD GITICRRIS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.69897
Match: 1suiA
Description: Alfalfa caffeoyl coenzyme A 3-O-methyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.25333584501255 bayes_pls_golite062009
transferase activity 0.999964866871553 bayes_pls_golite062009
methyltransferase activity 0.558878917426836 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.557560946446304 bayes_pls_golite062009
binding 0.348263200169904 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.0605581837493382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle