| Protein: | RPF2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 314 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPF2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
312.0 | [0..3] | [312..6] |
|
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310.0 | [0..3] | [312..6] |
|
|
307.0 | [0..3] | [312..6] |
|
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305.0 | [0..3] | [312..6] |
|
|
305.0 | [0..3] | [312..6] |
|
|
302.0 | [0..3] | [312..6] |
|
|
300.0 | [0..3] | [312..6] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MMEIRTPKTG KAKRVLESRA PKLVETGKKT LILHGTKTSA TLSSVMTELY RLKKGGAIRY 60
61 SRRNENIRPF ESGGETSLEF FSQKTDCSIF VYGSHTKKRP
|
| Detection Method: |  |
| Confidence: | 5.69897 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [101-210] |
1 11 21 31 41 51
| | | | | |
1 DNLVLGRMYD HQVYDLIEVG IENFKSLRAF SYDKKFAPHE GTKPFICFIG EGFENVSELK 60
61 HLKEVLTDLF RGEVVDNLNL TGLDRAYVCS AISPTKVFLT HCALKLKKSG
|
| Detection Method: | |
| Confidence: | 1.4 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [211-314] |
1 11 21 31 41 51
| | | | | |
1 SIVPRMELVE VGPSMDLVIR RNRLPNDSLM KEAMRTSKDK PKKKEKNVDQ DAVLGKTGKI 60
61 YMPDQKLKEM KLFDKSKGSK RERKDAKLKH KEETVAKKMK VSSE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.499 | N/A | N/A | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.499 | N/A | N/A | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.476 | N/A | N/A | b.121.3 | Nucleoplasmin-like core domain |
| View | Download | 0.476 | N/A | N/A | d.240.1 | Description not found. |
| View | Download | 0.471 | N/A | N/A | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.434 | N/A | N/A | b.24.1 | Hyaluronate lyase-like, C-terminal domain |
| View | Download | 0.416 | N/A | N/A | d.58.12 | eEF-1beta-like |
| View | Download | 0.398 | N/A | N/A | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.392 | N/A | N/A | b.24.1 | Hyaluronate lyase-like, C-terminal domain |
| View | Download | 0.376 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
