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View Structure Prediction Details

Protein: BRI1_ARATH
Organism: Arabidopsis thaliana
Length: 1196 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for BRI1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTFSSFFLS VTTLFFFSFF SLSFQASPSQ SLYREIHQLI SFKDVLPDKN LLPDWSSNKN  60
   61 PCTFDGVTCR DDKVTSIDLS SKPLNVGFSA VSSSLLSLTG LESLFLSNSH INGSVSGFKC 120
  121 SASLTSLDLS RNSLSGPVTT LTSLGSCSGL KFLNVSSNTL DFPGKVSGGL KLNSLEVLDL 180
  181 SANSISGANV VGWVLSDGCG ELKHLAI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.221849
Match: 1ogqA
Description: Polygalacturonase inhibiting protein PGIP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [208-534]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGNKISGDVD VSRCVNLEFL DVSSNNFSTG IPFLGDCSAL QHLDISGNKL SGDFSRAIST  60
   61 CTELKLLNIS SNQFVGPIPP LPLKSLQYLS LAENKFTGEI PDFLSGACDT LTGLDLSGNH 120
  121 FYGAVPPFFG SCSLLESLAL SSNNFSGELP MDTLLKMRGL KVLDLSFNEF SGELPESLTN 180
  181 LSASLLTLDL SSNNFSGPIL PNLCQNPKNT LQELYLQNNG FTGKIPPTLS NCSELVSLHL 240
  241 SFNYLSGTIP SSLGSLSKLR DLKLWLNMLE GEIPQELMYV KTLETLILDF NDLTGEIPSG 300
  301 LSNCTNLNWI SLSNNRLTGE IPKWIGR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.154902
Match: 2id5A
Description: No description for 2id5A was found.

Predicted Domain #3
Region A:
Residues: [535-676]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LENLAILKLS NNSFSGNIPA ELGDCRSLIW LDLNTNLFNG TIPAAMFKQS GKIAANFIAG  60
   61 KRYVYIKNDG MKKECHGAGN LLEFQGIRSE QLNRLSTRNP CNITSRVYGG HTSPTFDNNG 120
  121 SMMFLDMSYN MLSGYIPKEI GS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [677-824]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYLFILNLG HNDISGSIPD EVGDLRGLNI LDLSSNKLDG RIPQAMSALT MLTEIDLSNN  60
   61 NLSGPIPEMG QFETFPPAKF LNNPGLCGYP LPRCDPSNAD GYAHHQRSHG RRPASLAGSV 120
  121 AMGLLFSFVC IFGLILVGRE MRKRRRKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [825-1196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EAELEMYAEG HGNSGDRTAN NTNWKLTGVK EALSINLAAF EKPLRKLTFA DLLQATNGFH  60
   61 NDSLIGSGGF GDVYKAILKD GSAVAIKKLI HVSGQGDREF MAEMETIGKI KHRNLVPLLG 120
  121 YCKVGDERLL VYEFMKYGSL EDVLHDPKKA GVKLNWSTRR KIAIGSARGL AFLHHNCSPH 180
  181 IIHRDMKSSN VLLDENLEAR VSDFGMARLM SAMDTHLSVS TLAGTPGYVP PEYYQSFRCS 240
  241 TKGDVYSYGV VLLELLTGKR PTDSPDFGDN NLVGWVKQHA KLRISDVFDP ELMKEDPALE 300
  301 IELLQHLKVA VACLDDRAWR RPTMVQVMAM FKEIQAGSGI DSQSTIRSIE DGGFSTIEMV 360
  361 DMSIKEVPEG KL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.221849
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle