YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: BCAT5_ARATH
Organism: Arabidopsis thaliana
Length: 415 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BCAT5_ARATH.

Description E-value Query
Range
Subject
Range
gi|111074416 - gi|111074416|gb|ABH04581.1| At5g65780 [Arabidopsis thaliana]
480.0 [0..1] [415..1]

Back

Predicted Domain #1
Region A:
Residues: [1-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERSAVASGF HRNYILCASR AATSTTRLHS LSSLRNFPSS SLRIRHCPSP ISSNFIVSEV  60
   61 SRNRRCDAVS SSTTDVTELA EIDWDKIDFG LKPTDYMYAM KCSRDGEFSQ GQLQPFGNID 120
  121 INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA 180
  181 VKTTVLANKR WIPPPGKGSL YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP 240
  241 INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS 300
  301 CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG 360
  361 TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ MGLSEDNMNW TVQLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 104.0
Match: 2cogA
Description: Crystal structure of oxidized human cytosolic branched-chain aminotransferase complexed with 4-methylvalerate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle