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View Structure Prediction Details

Protein: BCAT3_ARATH
Organism: Arabidopsis thaliana
Length: 413 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BCAT3_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593211 - gi|21593211|gb|AAM65160.1| branched-chain-amino-acid transaminase-like protein [Arabidopsis thaliana...
434.0 [0..1] [413..1]

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Predicted Domain #1
Region A:
Residues: [1-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERAAILPSV NQNYLLCPSR AFSTRLHSST RNLSPPSFAS IKLQHSSSSV SSNGGISLTR  60
   61 CNAVSSNSSS TLVTELADID WDTVGFGLKP ADYMYVMKCN IDGEFSKGEL QRFGNIEISP 120
  121 SAGVLNYGQG LFEGLKAYRK KDGNNILLFR PEENAKRMRN GAERMCMPAP TVEQFVEAVT 180
  181 ETVLANKRWV PPPGKGSLYV RPLLMGTGAV LGLAPAPEYT FIIYVSPVGN YFKEGVAPIN 240
  241 LIVENEFHRA TPGGTGGVKT IGNYAAVLKA QSIAKAKGYS DVLYLDCIYK RYLEEVSSCN 300
  301 IFIVKDNVIS TPEIKGTILP GITRKSMIDV ARTQGFQVEE RNVTVDELLE ADEVFCTGTA 360
  361 VVVSPVGSVT YKGKRVSYGE GTFGTVSKQL YTVLTSLQMG LIEDNMKWTV NLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 92.522879
Match: 2cogA
Description: Crystal structure of oxidized human cytosolic branched-chain aminotransferase complexed with 4-methylvalerate
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle