| Protein: | AVP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 770 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AVP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1160.0 | [0..5] | [770..4] |
|
Region A: Residues: [1-54] |
1 11 21 31 41 51
| | | | | |
1 MVAPALLPEL WTEILVPICA VIGIAFSLFQ WYVVSRVKLT SDLGASSSGG ANNG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [55-127] |
1 11 21 31 41 51
| | | | | |
1 KNGYGDYLIE EEEGVNDQSV VAKCAEIQTA ISEGATSFLF TEYKYVGVFM IFFAAVIFVF 60
61 LGSVEGFSTD NKP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [128-219] |
1 11 21 31 41 51
| | | | | |
1 CTYDTTRTCK PALATAAFST IAFVLGAVTS VLSGFLGMKI ATYANARTTL EARKGVGKAF 60
61 IVAFRSGAVM GFLLAASGLL VLYITINVFK IY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [220-402] |
1 11 21 31 41 51
| | | | | |
1 YGDDWEGLFE AITGYGLGGS SMALFGRVGG GIYTKAADVG ADLVGKIERN IPEDDPRNPA 60
61 VIADNVGDNV GDIAGMGSDL FGSYAEASCA ALVVASISSF GINHDFTAMC YPLLISSMGI 120
121 LVCLITTLFA TDFFEIKLVK EIEPALKNQL IISTVIMTVG IAIVSWVGLP TSFTIFNFGT 180
181 QKV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [403-525] |
1 11 21 31 41 51
| | | | | |
1 VKNWQLFLCV CVGLWAGLII GFVTEYYTSN AYSPVQDVAD SCRTGAATNV IFGLALGYKS 60
61 VIIPIFAIAI SIFVSFSFAA MYGVAVAALG MLSTIATGLA IDAYGPISDN AGGIAEMAGM 120
121 SHR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [526-770] |
1 11 21 31 41 51
| | | | | |
1 IRERTDALDA AGNTTAAIGK GFAIGSAALV SLALFGAFVS RAGIHTVDVL TPKVIIGLLV 60
61 GAMLPYWFSA MTMKSVGSAA LKMVEEVRRQ FNTIPGLMEG TAKPDYATCV KISTDASIKE 120
121 MIPPGCLVML TPLIVGFFFG VETLSGVLAG SLVSGVQIAI SASNTGGAWD NAKKYIEAGV 180
181 SEHAKSLGPK GSEPHKAAVI GDTIGDPLKD TSGPSLNILI KLMAVESLVF APFFATHGGI 240
241 LFKYF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
