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View Structure Prediction Details

Protein: ATP7_ARATH
Organism: Arabidopsis thaliana
Length: 240 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATP7_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592716 - gi|21592716|gb|AAM64665.1| putative ATP synthase [Arabidopsis thaliana]
403.0 [0..1] [240..1]
gi|125537956 - gi|125537956|gb|EAY84351.1| hypothetical protein OsI_05726 [Oryza sativa Indica Group]
gi|115444021, gi... - gi|50905037|ref|XP_464007.1| putative ATP synthase [Oryza sativa (japonica cultivar-group)], gi|4105...
368.0 [0..1] [240..1]
gi|47607439 - gi|47607439|gb|AAT36616.1| mitochondrial ATP synthase precursor [Triticum aestivum]
347.0 [0..1] [240..1]
gi|217071378, gi... - gi|92885187|gb|ABE87707.1| hypothetical protein MtrDRAFT_AC155898g5v1 [Medicago truncatula], gi|2170...
336.0 [0..1] [240..1]
gi|421876, gi|396230 - pir||S35942 probable ATP synthase chain - soybean, gi|396230|emb|CAA52349.1| putative ATP synthase s...
300.0 [0..1] [179..1]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYASRFLSR SKQLQGGLVI LQQQHAIPVR AFAKEAARPT FKGDEMLKGV FFDIKNKFQA  60
   61 AVDILRKEKI TLDP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDPAAVKQYA NVMKTIRQKA DMFSESQRIK HDIDTETQDI PDARAYLLKL QEIRTRRGLT  60
   61 DELGAEAMMF EALEKVEKDI KKPLLRSDKK GMDLLVAEFE KGNKKLGIRK EDLPKYEENL 120
  121 ELSMAKAQLD ELKSDAVEAM ESQKKKEEFQ DEEMPDVKSL DIRNFI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.946 b.82.2 Clavaminate synthase-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle