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View Structure Prediction Details

Protein: SRK2G_ARATH
Organism: Arabidopsis thaliana
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRK2G_ARATH.

Description E-value Query
Range
Subject
Range
gi|16443, gi|99748 - pir||S24586 probable serine/threonine-specific protein kinase (EC 2.7.1.-) (clone ASK2) - Arabidopsi...
297.0 [0..1] [353..1]

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Predicted Domain #1
Region A:
Residues: [1-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKYDVVKDL GAGNFGVARL LRHKDTKELV AMKYIERGRK IDENVAREII NHRSLKHPNI  60
   61 IRFKEVILTP THLAIVMEYA SGGELFDRIC TAGRFSEAEA RYFFQQLICG VDYCHSLQIC 120
  121 HRDLKLENTL LDGSPAPLLK ICDFGYSKSS ILHSRPKSTV GTPAYIAPEV LSRREYDGKH 180
  181 ADVWSCGVTL YVMLVGAYPF EDPNDPKNFR KTIQRIMAVQ YKIPDYVHIS QECKHLLSRI 240
  241 FVTNSAKRIT LKEIKNHPWY LKNLPKELLE SAQAAYYKRD TSFSLQSVED IMKIVGEARN 300
  301 PAPSTSAVKS SGSGADEEEE EDVEAEVEEE EDDEDEYEKH VKEAQSCQES DKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.221849
Match: 1zmuA
Description: Catalytic and ubiqutin-associated domains of MARK2/PAR-1: Wild type
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle