| Protein: | ARFA_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 665 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARFA_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
764.0 | [0..1] | [665..1] |
|
|
676.0 | [0..2] | [659..4] |
|
|
666.0 | [0..17] | [661..21] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MAASNHSSGK PGGVLSDALC RELWHACAGP LVTLPREGER VYYFPEGHME QLEASMHQGL 60
61 EQQMPSFNLP SKILCKVINI QRRAEPETDE VYAQITLL
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [99-236] |
1 11 21 31 41 51
| | | | | |
1 PELDQSEPTS PDAPVQEPEK CTVHSFCKTL TASDTSTHGG FSVLRRHADD CLPPLDMSQQ 60
61 PPWQELVATD LHNSEWHFRH IFRGQPRRHL LTTGWSVFVS SKKLVAGDAF IFLRGENEEL 120
121 RVGVRRHMRQ QTNIPSSV
|
| Detection Method: | |
| Confidence: | 33.39794 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [237-353] |
1 11 21 31 41 51
| | | | | |
1 ISSHSMHIGV LATAAHAITT GTIFSVFYKP RTSRSEFIVS VNRYLEAKTQ KLSVGMRFKM 60
61 RFEGEEAPEK RFSGTIVGVQ ENKSSVWHDS EWRSLKVQWD EPSSVFRPER VSPWELE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.685 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.685 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.635 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.624 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.605 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.605 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.583 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.583 | N/A | N/A | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.521 | N/A | N/A | c.116.1 | alpha/beta knot |
| View | Download | 0.457 | N/A | N/A | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.405 | N/A | N/A | d.360.1 | Description not found. |
| View | Download | 0.384 | N/A | N/A | c.116.1 | alpha/beta knot |
|
Region A: Residues: [354-513] |
1 11 21 31 41 51
| | | | | |
1 PLVANSTPSS QPQPPQRNKR PRPPGLPSPA TGPSGPVTPD GVWKSPADTP SSVPLFSPPA 60
61 KAATFGHGGN KSFGVSIGSA FWPTNADSAA ESFASAFNNE STEKKQTNGN VCRLFGFELV 120
121 ENVNVDECFS AASVSGAVAV DQPVPSNEFD SGQQSEPLNI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [514-665] |
1 11 21 31 41 51
| | | | | |
1 NQSDIPSGSG DPEKSSLRSP QESQSRQIRS CTKVHMQGSA VGRAIDLTRS ECYEDLFKKL 60
61 EEMFDIKGEL LESTKKWQVV YTDDEDDMMM VGDDPWNEFC GMVRKIFIYT PEEVKKLSPK 120
121 NKLAVNARMQ LKADAEENGN TEGRSSSMAG SR
|
| Detection Method: | |
| Confidence: | 1.11 |
| Match: | 1ip9A |
| Description: | Bud emergence mediator Bemp1 |
Matching Structure (courtesy of the PDB): |
|
