| Protein: | APG_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 534 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APG_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
334.0 | [0..173] | [532..5] |
|
|
331.0 | [0..176] | [532..24] |
|
Region A: Residues: [1-180] |
1 11 21 31 41 51
| | | | | |
1 MKRSSLVDSC SYSRIFRSIF CLLSFCIFFL TTTNAQVMHR RLWPWPLWPR PYPQPWPMNP 60
61 PTPDPSPKPV APPGPSSKPV APPGPSPCPS PPPKPQPKPP PAPSPSPCPS PPPKPQPKPV 120
121 PPPACPPTPP KPQPKPAPPP EPKPAPPPAP KPVPCPSPPK PPAPTPKPVP PHGPPPKPAP 180
181
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [181-302] |
1 11 21 31 41 51
| | | | | |
1 APTPAPSPKP APSPPKPENK TIPAVFFFGD SVFDTGNNNN LETKIKSNYR PYGMDFKFRV 60
61 ATGRFSNGMV ASDYLAKYMG VKEIVPAYLD PKIQPNDLLT GVSFASGGAG YNPTTSEAAN 120
121 AI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [303-534] |
1 11 21 31 41 51
| | | | | |
1 PMLDQLTYFQ DYIEKVNRLV RQEKSQYKLA GLEKTNQLIS KGVAIVVGGS NDLIITYFGS 60
61 GAQRLKNDID SYTTIIADSA ASFVLQLYGY GARRIGVIGT PPLGCVPSQR LKKKKICNEE 120
121 LNYASQLFNS KLLLILGQLS KTLPNSTFVY MDIYTIISQM LETPAAYGFE ETKKPCCKTG 180
181 LLSAGALCKK STSKICPNTS SYLFWDGVHP TQRAYKTINK VLIKEYLHVL SK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
