| Protein: | RAP23_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 248 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RAP23_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
240.0 | [0..1] | [248..1] |
|
|
219.0 | [0..1] | [248..1] |
|
|
205.0 | [0..32] | [240..3] |
|
|
204.0 | [0..29] | [240..1] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MCGGAIISDY APLVTKAKGR KLTAEELWSE LDASAADDFW GFYSTSKLHP TNQVNVKEEA 60
61 VKKEQATEPG KRRKRKNVYR GIRKRPWGKW AAEIRDPRKG VRVWLGTFNT AEEAAMAYDV 120
121 AAKQIRGDKA KLNF
|
| Detection Method: |  |
| Confidence: | 21.045757 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [135-248] |
1 11 21 31 41 51
| | | | | |
1 PDLHHPPPPN YTPPPSSPRS TDQPPAKKVC VVSQSESELS QPSFPVECIG FGNGDEFQNL 60
61 SYGFEPDYDL KQQISSLESF LELDGNTAEQ PSQLDESVSE VDMWMLDDVI ASYE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.314 | c.61.1 | PRTase-like |
| View | Download | 0.289 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.264 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.263 | a.29.14 | Description not found. |
| View | Download | 0.258 | a.74.1 | Cyclin-like |
| View | Download | 0.258 | a.74.1 | Cyclin-like |
| View | Download | 0.228 | d.15.4 | 2Fe-2S ferredoxin-like |
| View | Download | 0.212 | d.110.4 | SNARE-like |
