YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ALG8_ARATH
Organism: Arabidopsis thaliana
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALG8_ARATH.

Description E-value Query
Range
Subject
Range
gi|47124844, gi|... - gi|47124844|gb|AAH70861.1| MGC84618 protein [Xenopus laevis], gi|147901994|ref|NP_001084808.1| hypot...
432.0 [0..4] [381..24]

Back

Predicted Domain #1
Region A:
Residues: [1-128]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHREKSDRR LLLWFFAVAT AVKLLLIPSS RSTDFEVHRN WLAITNSLPL TKWYFDETSQ  60
   61 WTLDYPPFFA YFERFLSIFA RLVDPRIVDL QSGLDYNAES VIYFQRISVI VSDLCLLYGV 120
  121 YRLTRKLE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [129-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLKRNLICAL VIWSPGLLIV DHIHFQYNGF LLGWLLLSIS FLQEGRDLLV TGFRRLVTIG  60
   61 AVVVAVFAAA YGPFIYHGQI QQVISRMFPF GRGLCHAYWA PNFWVFYIIL DKGLAVLLRK 120
  121 LGYEIQIPSA SFTGGLVGDS SPFAVLPQIT PLTTFAMVLL AISPCLIKAW KKP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [302-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HSGLVARWVA YAYTCGFLFG WHVHEKASLH FTIPLAIVAV QSLEDAKHYF LVSIVSCYSL  60
   61 YPLLYEPRST RSRFCCCYCI PW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle