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View Structure Prediction Details

Protein: ALA2_ARATH
Organism: Arabidopsis thaliana
Length: 1107 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for ALA2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-1028]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRFVYINDD EASKELCCDN RISNRKYTLW NFLPKNLWEQ FSRFMNQYFL LIACLQLWSL  60
   61 ITPVNPASTW GPLIFIFAVS ASKEAWDDYH RYLSDKKANE KEVWIVKQGI KKHIQAQDIQ 120
  121 VGNIVWLREN DEVPCDLVLL GTSDPQGVCY VETAALDGET DLKTRVIPSA CVGIDLELLH 180
  181 KMKGVIECPV PDKDIRRFDA NMRLFPPFID NDVCSLTIKN TLLQSCYLRN TEWACGVSVY 240
  241 TGNQTKLGMS RGIAEPKLTA MDAMIDKLTG AIFVFQIVVV LVLGIAGNVW KDTEARKQWY 300
  301 VQYPEEAPWY ELLVIPLRFE LLCSIMIPIS IKVSLDLVKG LYAKFIEWDV EMIDQETGTA 360
  361 SYAANTAISE DLGQVEYILT DKTGTLTDNK MIFRRCCIGG IFYGNENGDA LKDAQLLNAI 420
  421 TSGSTDVIRF LTVMAICNTV LPVQSKAGDI VYKAQSQDED ALVIAASKLH MVFVGKNANL 480
  481 LEIRFNGSVI RYEVLEILEF TSDRKRMSVV VKDCQNGKII LLSKGADEAI LPYARAGQQT 540
  541 RTIGDAVEHY SQLGLRTLCL AWRELEENEY LEWSVKFKEA SSLLVDREWR IAEVCQRLEH 600
  601 DLYILGVTAI EDRLQDGVPE TIETLRKAGI NFWMLTGDKQ NTAIQIALSC NFISPEPKGQ 660
  661 LLMIDGKTEE DVSRSLERVL LTMRITASEP KDVAFVIDGW ALEIALKHHR KDFVELAILS 720
  721 RTAICCRVTP SQKAQLVEIL KSCDYRTLAI GDGGNDVRMI QQADIGVGIS GREGLQAARA 780
  781 ADYSIGRFRF LKRLILVHGR YSYNRTAFLS QYSFYKSLLI CFIQIFFSFI SGVSGTSLFN 840
  841 SVSLMAYNVF YTSVPVLVSV IDKDLSEASV MQHPQILFYC QAGRLLNPST FAGWFGRSLF 900
  901 HAIIVFVITI HAYAYEKSEM EELGMVALSG CIWLQAFVVA QETNSFTVLQ HLSIWGNLVG 960
  961 FYAINFLFSA IPSSGMYTIM FRLCSQPSYW ITMFLIVGAG MGPIFALKYF RYTYRPSKIN1020
 1021 ILQQAERM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 171.0
Match: 3b8eA
Description: No description for 3b8eA was found.

Predicted Domain #2
Region A:
Residues: [1029-1107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGPILTLGNI ETQPRTIEKD LSPISITQPK NRSPVYEPLL SDSPNATRRS FGPGTPFEFF  60
   61 QSQSRLSSSS GYTRNCKDN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle