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View Structure Prediction Details

Protein: AKT2_ARATH
Organism: Arabidopsis thaliana
Length: 802 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for AKT2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLKYSASHC NLSSDMKLRR FHQHRGKGRE EEYDASSLSL NNLSKLILPP LGVASYNQNH  60
   61 IRSSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [66-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WIISPMDSRY RCWEFYMVLL VAYSAWVYPF EVAFLNSSPK RNLCIADNIV DLFFAVDIVL  60
   61 TFFVAYIDER TQLLVREPKQ IAVRYLSTWF LMDVASTIPF DAIGYLITGT STLNITCNLL 120
  121 GLLRFWRLRR VKHLFTRLEK DIRYSYFWIR CFRLLSVTLF LVHCAGCSYY LIADRYPHQG 180
  181 KTWTDAIPNF TETSLSIRYI AAIYWSITTM TTVGYGDLHA SNTIEMVFIT VYMLFNLGLT 240
  241 AYLIGNMTNL VVEGTRRTME FRNSIEAASN FVNRNRLPPR LKDQILAYMC LRFKAESLNQ 300
  301 QHLIDQLPKS IYKSICQHLF LPSVEKVYLF KG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.30103
Match: 2a79B
Description: Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [398-802]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSREILLLLV SKMKAEYIPP REDVIMQNEA PDDVYIIVSG EVEIIDSEME RESVLGTLRC  60
   61 GDIFGEVGAL CCRPQSYTFQ TKSLSQLLRL KTSFLIETMQ IKQQDNATML KNFLQHHKKL 120
  121 SNLDIGDLKA QQNGENTDVV PPNIASNLIA VVTTGNAALL DELLKAKLSP DITDSKGKTP 180
  181 LHVAASRGYE DCVLVLLKHG CNIHIRDVNG NSALWEAIIS KHYEIFRILY HFAAISDPHI 240
  241 AGDLLCEAAK QNNVEVMKAL LKQGLNVDTE DHHGVTALQV AMAEDQMDMV NLLATNGADV 300
  301 VCVNTHNEFT PLEKLRVVEE EEEEERGRVS IYRGHPLERR ERSCNEAGKL ILLPPSLDDL 360
  361 KKIAGEKFGF DGSETMVTNE DGAEIDSIEV IRDNDKLYFV VNKII

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.522879
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle