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View Structure Prediction Details

Protein: HMA6_ARATH
Organism: Arabidopsis thaliana
Length: 949 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for HMA6_ARATH.

Predicted Domain #1
Region A:
Residues: [1-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESTLSAFST VKATAMARSS GGPSLPLLTI SKALNRHFTG ARHLHPLLLA RCSPSVRRLG  60
   61 GFHGSRFTSS NSALRSLGAA VLPVIRHRLE CLSSSSPSFR SISSGGGSGF GGYNGGSGGG 120
  121 GGGGSESGDS KSKLGANASD GVSVPSSDII ILDVGGMTCG GCSASVKKIL ESQPQVASAS 180
  181 VNLTTETAIV WPVPEAKSVP DWQKSLGETL ANHLTNCGFQ STPRDLVTEN FFKVFETKTK 240
  241 DKQARLKESG RELAVSWALC AVCLVGHLTH FLGVNAPWIH AIHSTGFHVS LCLITLLG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.522879
Match: 2ropA
Description: No description for 2ropA was found.

Predicted Domain #2
Region A:
Residues: [299-949]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGRKLVLDGI KSLLKGSPNM NTLVGLGALS SFSVSSLAAM IPKLGWKTFF EEPVMLIAFV  60
   61 LLGRNLEQRA KIKATSDMTG LLSVLPSKAR LLLDGDLQNS TVEVPCNSLS VGDLVVILPG 120
  121 DRVPADGVVK SGRSTIDESS FTGEPLPVTK ESGSQVAAGS INLNGTLTVE VHRSGGETAV 180
  181 GDIIRLVEEA QSREAPVQQL VDKVAGRFTY GVMALSAATF TFWNLFGAHV LPSALHNGSP 240
  241 MSLALQLSCS VLVVACPCAL GLATPTAMLV GTSLGARRGL LLRGGDILEK FSLVDTVVFD 300
  301 KTGTLTKGHP VVTEVIIPEN PRHNLNDTWS EVEVLMLAAA VESNTTHPVG KAIVKAARAR 360
  361 NCQTMKAEDG TFTEEPGSGA VAIVNNKRVT VGTLEWVKRH GATGNSLLAL EEHEINNQSV 420
  421 VYIGVDNTLA AVIRFEDKVR EDAAQVVENL TRQGIDVYML SGDKRNAANY VASVVGINHE 480
  481 RVIAGVKPAE KKNFINELQK NKKIVAMVGD GINDAAALAS SNVGVAMGGG AGAASEVSPV 540
  541 VLMGNRLTQL LDAMELSRQT MKTVKQNLWW AFGYNIVGIP IAAGVLLPLT GTMLTPSMAG 600
  601 ALMGVSSLGV MTNSLLLRYR FFSNRNDKNV KPEPKEGTKQ PHENTRWKQS S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 113.0
Match: 3b8eA
Description: No description for 3b8eA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle