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View Structure Prediction Details

Protein: HMA7_ARATH
Organism: Arabidopsis thaliana
Length: 1001 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for HMA7_ARATH.

Predicted Domain #1
Region A:
Residues: [1-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSRRDLQL TPVTGGSSSQ ISDMEEVGLL DSYHNEANAD DILTKIEEGR DVSGLRKIQV  60
   61 GVTGMTCAAC SNSVEAALMN VNGVFKASVA LLQNRADVVF DPNLVKEEDI KEAIEDAGFE 120
  121 AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN 180
  181 VINKDDIVNA IEDAGFEGSL VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL 240
  241 DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI 300
  301 SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.221849
Match: 2ropA
Description: No description for 2ropA was found.

Predicted Domain #2
Region A:
Residues: [351-548]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP TYFDASAMLI  60
   61 TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL 120
  121 KVHPGAKIPA DGVVVWGSSY VNESMVTGES VPVSKEVDSP VIGGTINMHG ALHMKATKVG 180
  181 SDAVLSQIIS LVETAQMS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.69897
Match: 2hc8A
Description: No description for 2hc8A was found.

Predicted Domain #3
Region A:
Residues: [549-615]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAPIQKFADY VASIFVPVVI TLALFTLVGW SIGGAVGAYP DEWLPENGTH FVFSLMFSIS  60
   61 VVVIACP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [616-1001]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CALGLATPTA VMVATGVGAT NGVLIKGGDA LEKAHKVKYV IFDKTGTLTQ GKATVTTTKV  60
   61 FSEMDRGEFL TLVASAEASS EHPLAKAIVA YARHFHFFDE STEDGETNNK DLQNSGWLLD 120
  121 TSDFSALPGK GIQCLVNEKM ILVGNRKLMS ENAINIPDHV EKFVEDLEES GKTGVIVAYN 180
  181 GKLVGVMGIA DPLKREAALV VEGLLRMGVR PIMVTGDNWR TARAVAKEVG IEDVRAEVMP 240
  241 AGKADVIRSL QKDGSTVAMV GDGINDSPAL AAADVGMAIG AGTDVAIEAA DYVLMRNNLE 300
  301 DVITAIDLSR KTLTRIRLNY VFAMAYNVVS IPIAAGVFFP VLRVQLPPWA AGACMALSSV 360
  361 SVVCSSLLLR RYKKPRLTTV LKITTE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.09691
Match: 2b8eA
Description: CopA ATP Binding Domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle