Protein: | AGL17_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 227 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGL17_ARATH.
Description | E-value | Query Range |
Subject Range |
|
219.0 | [0..1] | [221..1] |
Region A: Residues: [1-77] |
1 11 21 31 41 51 | | | | | | 1 MGRGKIVIQK IDDSTSRQVT FSKRRKGLIK KAKELAILCD AEVCLIIFSN TDKLYDFASS 60 61 SVKSTIERFN TAKMEEQ |
Detection Method: | |
Confidence: | 20.69897 |
Match: | 1tqeP |
Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 1.0368771990474 | bayes_pls_golite062009 |
Region A: Residues: [78-227] |
1 11 21 31 41 51 | | | | | | 1 ELMNPASEVK FWQREAETLR QELHSLQENY RQLTGVELNG LSVKELQNIE SQLEMSLRGI 60 61 RMKREQILTN EIKELTRKRN LVHHENLELS RKVQRIHQEN VELYKKAYGT SNTNGLGHHE 120 121 LVDAVYESHA QVRLQLSQPE QSHYKTSSNS |
Detection Method: | |
Confidence: | 14.853872 |
Match: | PF01486.8 |
Description: | No description for PF01486.8 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.455 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
View | Download | 0.443 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
View | Download | 0.374 | N/A | N/A | a.19.1 | Fertilization protein |
View | Download | 0.374 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
View | Download | 0.354 | N/A | N/A | a.19.1 | Fertilization protein |