| Protein: | AGL15_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 268 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGL15_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
219.0 | [0..7] | [268..1] |
|
|
219.0 | [0..1] | [240..1] |
|
|
219.0 | [0..1] | [240..1] |
|
|
218.0 | [0..1] | [239..1] |
|
|
217.0 | [0..1] | [240..1] |
|
|
217.0 | [0..1] | [240..1] |
|
|
215.0 | [0..1] | [240..1] |
|
Region A: Residues: [1-74] |
1 11 21 31 41 51
| | | | | |
1 MGRGKIEIKR IENANSRQVT FSKRRSGLLK KARELSVLCD AEVAVIVFSK SGKLFEYSST 60
61 GMKQTLSRYG NHQS
|
| Detection Method: |  |
| Confidence: | 20.154902 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [75-204] |
1 11 21 31 41 51
| | | | | |
1 SSASKAEEDC AEVDILKDQL SKLQEKHLQL QGKGLNPLTF KELQSLEQQL YHALITVRER 60
61 KERLLTNQLE ESRLKEQRAE LENETLRRQV QELRSFLPSF THYVPSYIKC FAIDPKNALI 120
121 NHDSKCSLQN
|
| Detection Method: | |
| Confidence: | 19.79588 |
| Match: | PF01486.8 |
| Description: | No description for PF01486.8 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.937 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.937 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.930 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.930 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.838 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.838 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.833 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.801 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.796 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.795 | N/A | N/A | a.19.1 | Fertilization protein |
|
Region A: Residues: [205-268] |
1 11 21 31 41 51
| | | | | |
1 TDSDTTLQLG LPGEAHDRRT NEGERESPSS DSVTTNTSSE TAERGDQSSL ANSPPEAKRQ 60
61 RFSV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.551 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.457 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.414 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.398 | a.189.1 | Description not found. |
| View | Download | 0.398 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.398 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.289 | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.252 | a.28.1 | ACP-like |
| View | Download | 0.227 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
