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View Structure Prediction Details

Protein: DEF14_ARATH
Organism: Arabidopsis thaliana
Length: 80 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DEF14_ARATH.

Description E-value Query
Range
Subject
Range
DEF4_RAPSA - Defensin-like protein 4 OS=Raphanus sativus GN=AFP4 PE=3 SV=1
104.0 [0..1] [80..1]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSAAIITF LFAALVLFAA FEAPIMVEAQ KLCEKPSGTW SGVCGNSNAC KNQCINLEGA  60
   61 KHGSCNYVFP AHKCICYFPC 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.51
Match: 1ayjA
Description: DETERMINATION OF THE THREE-DIMENSIONAL SOLUTION STRUCTURE OF RAPHANUS SATIVUS ANTIFUNGAL PROTEIN 1 (RS-AFP1) BY 1H NMR, 20 STRUCTURES
Matching Structure (courtesy of the PDB):

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