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View Structure Prediction Details

Protein: ACEA_ARATH
Organism: Arabidopsis thaliana
Length: 576 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACEA_ARATH.

Description E-value Query
Range
Subject
Range
ACEA_GOSHI - Isocitrate lyase OS=Gossypium hirsutum PE=2 SV=1
716.0 [0..1] [576..1]

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Predicted Domain #1
Region A:
Residues: [1-576]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASFSVPSM IMEEEGRFEA EVAEVQTWWS SERFKLTRRP YTARDVVALR GHLKQGYASN  60
   61 EMAKKLWRTL KSHQANGTAS RTFGALDPVQ VTMMAKHLDT IYVSGWQCSS THTSTNEPGP 120
  121 DLADYPYDTV PNKVEHLFFA QQYHDRKQRE ARMSMSREER TKTPFVDYLK PIIADGDTGF 180
  181 GGTTATVKLC KLFVERGAAG VHIEDQSSVT KKCGHMAGKV LVAVSEHINR LVAARLQFDV 240
  241 MGTETVLVAR TDAVAATLIQ SNIDARDHQF ILGATNPSLR GKSLSSLLAE GMTVGKNGPA 300
  301 LQSIEDQWLG SAGLMTFSEA VVQAIKRMNL NENEKNQRLS EWLTHARYEN CLSNEQGRVL 360
  361 AAKLGVTDLF WDWDLPRTRE GFYRFQGSVA AAVVRGWAFA QIADIIWMET ASPDLNECTQ 420
  421 FAEGIKSKTP EVMLAYNLSP SFNWDASGMT DQQMVEFIPR IARLGYCWQF ITLAGFHADA 480
  481 LVVDTFAKDY ARRGMLAYVE RIQREERTHG VDTLAHQKWS GANYYDRYLK TVQGGISSTA 540
  541 AMGKGVTEEQ FKESWTRPGA DGMGEGTSLV VAKSRM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1dquA
Description: Isocitrate lyase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
isocitrate lyase activity 4.96824258511407 bayes_pls_golite062009
methylisocitrate lyase activity 4.21728284668468 bayes_pls_golite062009
catalytic activity 2.59838799615646 bayes_pls_golite062009
transferase activity 1.07154136609184 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.366715189574293 bayes_pls_golite062009
lyase activity 0.0456521871650777 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle