| Protein: | ABI3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 720 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ABI3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
724.0 | [0..2] | [719..1] |
|
Region A: Residues: [1-307] |
1 11 21 31 41 51
| | | | | |
1 MKSLHVAANA GDLAEDCGIL GGDADDTVLM DGIDEVGREI WLDDHGGDNN HVHGHQDDDL 60
61 IVHHDPSIFY GDLPTLPDFP CMSSSSSSST SPAPVNAIVS SASSSSAASS STSSAASWAI 120
121 LRSDGEDPTP NQNQYASGNC DDSSGALQST ASMEIPLDSS QGFGCGEGGG DCIDMMETFG 180
181 YMDLLDSNEF FDTSAIFSQD DDTQNPNLMD QTLERQEDQV VVPMMENNSG GDMQMMNSSL 240
241 EQDDDLAAVF LEWLKNNKET VSAEDLRKVK IKKATIESAA RRLGGGKEAM KQLLKLILEW 300
301 VQTNHLQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [308-468] |
1 11 21 31 41 51
| | | | | |
1 RRRTTTTTTN LSYQQSFQQD PFQNPNPNNN NLIPPSDQTC FSPSTWVPPP PQQQAFVSDP 60
61 GFGYMPAPNY PPQPEFLPLL ESPPSWPPPP QSGPMPHQQF PMPPTSQYNQ FGDPTGFNGY 120
121 NMNPYQYPYV PAGQMRDQRL LRLCSSATKE ARKKRMARQR R
|
| Detection Method: | |
| Confidence: | 7.045757 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [469-568] |
1 11 21 31 41 51
| | | | | |
1 FLSHHHRHNN NNNNNNNNQQ NQTQIGETCA AVAPQLNPVA TTATGGTWMY WPNVPAVPPQ 60
61 LPPVMETQLP TMDRAGSASA MPRQQVVPDR RQGWKPEKNL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [569-720] |
1 11 21 31 41 51
| | | | | |
1 RFLLQKVLKQ SDVGNLGRIV LPKKEAETHL PELEARDGIS LAMEDIGTSR VWNMRYRFWP 60
61 NNKSRMYLLE NTGDFVKTNG LQEGDFIVIY SDVKCGKYLI RGVKVRQPSG QKPEAPPSSA 120
121 ATKRQNKSQR NINNNSPSAN VVVASPTSQT VK
|
| Detection Method: | |
| Confidence: | 26.69897 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
