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View Structure Prediction Details

Protein: 2SS3_ARATH
Organism: Arabidopsis thaliana
Length: 164 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 2SS3_ARATH.

Description E-value Query
Range
Subject
Range
gi|167177, gi|68851 - pir||NWRP2 napin 2 precursor - rape, gi|167177|gb|AAA33006.1| napin prepropeptide
164.0 [0..1] [163..1]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANKLFLVCA TLALCFLLTN ASIYRTVVEF EEDDASNPVG PRQRCQKEFQ QSQHLRACQR  60
   61 WMSKQMRQGR GGGPSLDDEF DFEGPQQGYQ LLQQCCNELR QEEPVCVCPT LKQAARAVSL 120
  121 QGQHGPFQSR KIYQSAKYLP NICKIQQVGE CPFQTTIPFF PPYY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.045757
Match: 1sm7A
Description: Solution structure of the recombinant pronapin precursor, BnIb.
Matching Structure (courtesy of the PDB):

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