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View Structure Prediction Details

Protein: gi|1750109, gi|8...
Organism: Bacillus subtilis
Length: 421 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|1750109, gi|8....

Description E-value Query
Range
Subject
Range
gi|28204552, gi|... - gi|28212109|ref|NP_783053.1| methionine gamma-lyase [Clostridium tetani E88], gi|28204552|gb|AAO3699...
358.0 [0..8] [417..5]

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Predicted Domain #1
Region A:
Residues: [1-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDTLTHGEL LKKTAMEVEA DIAGIHKQIE EISERNEWRV LQSYRKHKVS DTHFTPSTGY  60
   61 GYDDIGRDTL ESIYADVFGG EAGLVRPQII SGTHAISIAL FGVLRPGDEL LYITGKPYDT 120
  121 LEEIVGVRGG ENAGSLKDFQ IGYNAVDLTK DGKIDYDAVA AAINPKTKVI GIQRSKGYAN 180
  181 RPSFLISEIK EMIRFVKEIN ENLIVFVDNC YGEFVEELEP CHVGADLMAG SLIKNPGGGL 240
  241 AKTGGYLVGK AKWIEACSYR MTSPGIGREA GASLYSLQEM YQGFFLAPHV VSQSLKGAVF 300
  301 TARFLEKLGF TSNPKWDAKR TDLIQSVEFS DGEKMIAFCQ AIQFASPIDA HVTPYPAYMP 360
  361 GYEDDVIMAA GTFIQGASIE LSADGPIRPP YVAYVQGGLT YSHVKNAICS AVDSLMQKQL 420
  421 I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.0
Match: 1y4iA
Description: Crystal structure of Citrobacter Freundii L-methionine-lyase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.53236054463719 bayes_pls_golite062009
transferase activity 0.233280663075854 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle