| Protein: | YHCA_BACSU |
| Organism: | Bacillus subtilis |
| Length: | 532 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHCA_BACSU.
| Description | E-value | Query Range |
Subject Range |
|
|
326.0 | [0..29] | [530..1460] |
|
Region A: Residues: [1-532] |
1 11 21 31 41 51
| | | | | |
1 MATGKEKNAK NPMSLLIVLM AGLFLAILNQ TLLNVAMPHL MTEFGVSATT IQWLTTGYML 60
61 VNGVLIPLSA FLITRFGQRS LFLVAMFCFT LGTLVCGIAP NFSTMLIGRL IQAVGGGILQ 120
121 PLVMTTILLI FPPESRGKGM GIFGLAMMFA PAVGPTLSGW IIEHYTWRIM FYGLVPIGAI 180
181 VIIVAFFIFK NMVEPQKIKL DTLGAILSIV GFASLLYGVS EAGSDGWTDP IVLSTVIIGA 240
241 IAIVAFVVQQ LRHDDPMLDF RVFKYDIFSL SSVINIIITV ALYTGMFLLP IYLQNLVGFT 300
301 ALQSGLLLLP GAIVMLIMSP ISGILFDKFG PRPLAIIGLL VTVVTTYQYT QLTIDTPYTH 360
361 IMLIYSIRAF GMSLLMMPVM TAGMNQLPAR LNSHGTAMSN TLRQISGSIG TSLITTIYTN 420
421 RTTFHYSQIA DKTSTADPNF LHAFQNAVSN LMVNMNVSYD TAKTYVYSHI YKHASLDSNV 480
481 MGINDAFMWA TLFCVAGLIL SIFLRDVRKD KLRKKKKEEL SLLPAPKEAK ES
|
| Detection Method: |  |
| Confidence: | 25.045757 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| binding | 1.01584233411372 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
