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View Structure Prediction Details

Protein: DUS1_BACSU
Organism: Bacillus subtilis
Length: 333 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DUS1_BACSU.

Description E-value Query
Range
Subject
Range
gi|52346439, gi|... - gi|52783937|ref|YP_089766.1| YacF [Bacillus licheniformis ATCC 14580], gi|52346439|gb|AAU39073.1| Ya...
323.0 [0..1] [333..1]

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Predicted Domain #1
Region A:
Residues: [1-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKIGDIQLK NRVVLAPMAG VCNSAFRLTV KEFGAGLVCA EMVSDKAILY NNARTMGMLY  60
   61 IDEREKPLSL QIFGGKKETL VEAAKFVDQN TTADIIDINM GCPVPKITKC DAGAKWLLDP 120
  121 DKIYEMVSAV VDAVNKPVTV KMRMGWDEDH IFAVKNAQAV ERAGGKAVAL HGRTRVQMYE 180
  181 GTANWDIIKE VKQSVSIPVI GNGDVKTPQD AKRMLDETGV DGVMIGRAAL GNPWMIYRTV 240
  241 QYLETGKLKE EPQVREKMAV CKLHLDRLID LKGENVAVRE MRKHAAWYLK GVKGNANVRN 300
  301 EINHCETREE FVQLLDAFTV EVEAKELQNA KVG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.522879
Match: 1vhnA
Description: Crystal structure of a putative flavin oxidoreductase with flavin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.94749091175302 bayes_pls_golite062009
tRNA dihydrouridine synthase activity 1.94490879164338 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle