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View Structure Prediction Details

Protein: TGT_BACSU
Organism: Bacillus subtilis
Length: 381 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TGT_BACSU.

Description E-value Query
Range
Subject
Range
gi|126700418, gi... - gi|126700418|ref|YP_001089315.1| queuine tRNA-ribosyltransferase [Clostridium difficile 630], gi|115...
585.0 [0..5] [374..9]

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Predicted Domain #1
Region A:
Residues: [1-381]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEQPIRYEF IKECKQTGAR LGKVHTPHGS FETPVFMPVG TLATVKTMSP EELKAMDAGI  60
   61 ILSNTYHLWL RPGQDIVKEA GGLHKFMNWD RAILTDSGGF QVFSLSKFRN IEEEGVHFRN 120
  121 HLNGDKLFLS PEKAMEIQNA LGSDIMMAFD ECPPYPAEYD YMKRSVERTS RWAERCLNAH 180
  181 NRQDEQGLFG IVQGGEYEDL RTQSAKDLIS LDFPGYAIGG LSVGEPKDVM NRVLEFTTPL 240
  241 LPKDKPRYLM GVGSPDALID GAIRGVDMFD CVLPTRIARN GTVFTAEGRL NMKNAKFERD 300
  301 FRPIDEECDC YTCKNYTRAY IRHLIRCNET FGLRLTTYHN LHFLLHLMEQ VRQAIREDRL 360
  361 GDFREEFFER YGYNKPNAKS F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 151.0
Match: 1ozmA
Description: Y106F mutant of Z. mobilis TGT
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
queuine tRNA-ribosyltransferase activity 5.68673071384353 bayes_pls_golite062009
transferase activity 3.21194535271238 bayes_pls_golite062009
transferase activity, transferring pentosyl groups 2.84864811414771 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 2.53039738178366 bayes_pls_golite062009
catalytic activity 2.02168745464921 bayes_pls_golite062009
binding 1.29132603807317 bayes_pls_golite062009
protein binding 0.136438951368546 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle