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View Structure Prediction Details

Protein: NADE_BACSU
Organism: Bacillus subtilis
Length: 272 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NADE_BACSU.

Description E-value Query
Range
Subject
Range
NADE_BACCN - NH(3)-dependent NAD(+) synthetase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / ...
269.0 [0..1] [272..1]

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Predicted Domain #1
Region A:
Residues: [1-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMQEKIMRE LHVKPSIDPK QEIEDRVNFL KQYVKKTGAK GFVLGISGGQ DSTLAGRLAQ  60
   61 LAVESIREEG GDAQFIAVRL PHGTQQDEDD AQLALKFIKP DKSWKFDIKS TVSAFSDQYQ 120
  121 QETGDQLTDF NKGNVKARTR MIAQYAIGGQ EGLLVLGTDH AAEAVTGFFT KYGDGGADLL 180
  181 PLTGLTKRQG RTLLKELGAP ERLYLKEPTA DLLDEKPQQS DETELGISYD EIDDYLEGKE 240
  241 VSAKVSEALE KRYSMTEHKR QVPASMFDDW WK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.221849
Match: 1ee1A
Description: NH3-dependent NAD+-synthetase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ligase activity, forming carbon-nitrogen bonds 1.9422825865652 bayes_pls_golite062009
carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.77152913449838 bayes_pls_golite062009
GMP synthase (glutamine-hydrolyzing) activity 1.08094655947236 bayes_pls_golite062009
ligase activity 1.02544349488516 bayes_pls_golite062009
catalytic activity 0.828867994386867 bayes_pls_golite062009
NAD+ synthase activity 0.693146657234538 bayes_pls_golite062009
binding 0.268276895381766 bayes_pls_golite062009
protein binding 0.0198162482538781 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle