YRC Public Data Repository - Protein Structure Prediction

Protein:	MRPG_BACSU
Organism:	Bacillus subtilis
Length:	124 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPG_BACSU.

Description	E-value	Query Range	Subject Range
gi\|22778791, gi\|... - gi\|23100558\|ref\|NP_694025.1\| putative monovalent cation/H+ antiporter subunit G [Oceanobacillus ihey...	138.0	[0..4]	[121..6]
gi\|52004872, gi\|... - gi\|52787046\|ref\|YP_092875.1\| putative monovalent cation/H+ antiporter subunit G [Bacillus lichenifor...	138.0	[0..1]	[124..1]
gi\|56909637, gi\|... - gi\|56963394\|ref\|YP_175125.1\| putative monovalent cation/H+ antiporter subunit G [Bacillus clausii KS...	137.0	[0..2]	[122..1]
gi\|6650389 - gi\|6650389\|gb\|AAF21818.1\|AF097740_7 multiple resistance and pH regulation related protein G [Bacillu... MRPG_BACPE - Na(+)/H(+) antiporter subunit G OS=Bacillus pseudofirmus (strain OF4) GN=mrpG PE=1 SV=1 MRPG_BACPF - Na(+)/H(+) antiporter subunit G OS=Bacillus pseudofirmus GN=mrpG PE=1 SV=1	133.0	[0..2]	[120..1]
gi\|119863699, gi... - gi\|119945095\|ref\|YP_942775.1\| monovalent cation/proton antiporter, MnhG/PhaG subunit [Psychromonas i...	131.0	[0..1]	[121..1]
gi\|84517165, gi\|... - gi\|84517165\|ref\|ZP_01004521.1\| pH adaption potassium efflux system protein PhaG [Loktanella vestfold...	131.0	[0..1]	[103..3]
gi\|110648625, gi... - gi\|110835514\|ref\|YP_694373.1\| putative monovalent cation/H+ antiporter subunit G [Alcanivorax borkum...	130.0	[0..1]	[104..1]
gi\|91796116, gi\|... - gi\|92113026\|ref\|YP_572954.1\| Na+/H+ antiporter subunit [Chromohalobacter salexigens DSM 3043], gi\|91...	130.0	[0..1]	[120..4]
gi\|172057712, gi... - gi\|68054014\|ref\|ZP_00538179.1\| Na+/H+ antiporter subunit [Exiguobacterium sibiricum 255-15], gi\|6800...	130.0	[0..1]	[110..1]

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Predicted Domain #1

Region A:
Residues: [1-124]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIETAKVVVA VFILLGALIC LIASFGVLRL PDVFTRAHAA SKGSTLGVNM ILLGVFFYLW  60
   61 FVTGELSAKI LLGILFIFIT SPIGGHLICR AAYNSGVKLD ERSVQDDYNG IRNFVIKRKE 120
  121 DSYL

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	58.744727
Match:	PF03334.5
Description:	No description for PF03334.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.943	N/A	N/A	a.24.9	alpha-catenin/vinculin
View	Download	0.925	N/A	N/A	a.24.9	alpha-catenin/vinculin
View	Download	0.923	N/A	N/A	a.24.9	alpha-catenin/vinculin
View	Download	0.922	N/A	N/A	a.24.9	alpha-catenin/vinculin
View	Download	0.917	N/A	N/A	a.24.9	alpha-catenin/vinculin
View	Download	0.901	N/A	N/A	a.7.12	Description not found.
View	Download	0.895	N/A	N/A	a.23.1	HSC20 (HSCB), C-terminal oligomerisation domain
View	Download	0.895	N/A	N/A	a.23.1	HSC20 (HSCB), C-terminal oligomerisation domain
View	Download	0.874	N/A	N/A	f.36.1	Neurotransmitter-gated ion-channel pransmembrane pore
View	Download	0.847	N/A	N/A	a.24.9	alpha-catenin/vinculin

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits