YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCC338.14
Organism:	Schizosaccharomyces pombe
Length:	340 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC338.14.

Description	E-value	Query Range	Subject Range
gi\|28203058, gi\|... - gi\|28210620\|ref\|NP_781564.1\| ribokinase [Clostridium tetani E88], gi\|28203058\|gb\|AAO35501.1\| ribokin...	233.0	[0..1]	[338..1]
gi\|29367547 - gi\|29367547\|gb\|AAO72629.1\| adenosine kinase-like protein [Oryza sativa (japonica cultivar-group)]	230.0	[0..2]	[331..32]
gi\|39645529, gi\|... - gi\|47086461\|ref\|NP_997956.1\| adenosine kinase a [Danio rerio], gi\|39645529\|gb\|AAH63961.1\| Adenosine ...	228.0	[0..1]	[337..18]
gi\|92887737 - gi\|92887737\|gb\|ABE89020.1\| Adenosine kinase [Medicago truncatula]	228.0	[0..6]	[331..7]
gi\|149031256, gi... - gi\|52345435\|ref\|NP_037027.2\| adenosine kinase [Rattus norvegicus], gi\|51980272\|gb\|AAH81712.1\| Adenos...	228.0	[0..1]	[331..20]
gi\|11279637, gi\|... - gi\|1749554\|dbj\|BAA13835.1\| unnamed protein product [Schizosaccharomyces pombe], gi\|11279637\|pir\|\|T42...	227.0	[0..1]	[340..12]
gi\|51949804, gi\|... - gi\|51949806\|gb\|AAU14835.1\| adenosine kinase isoform 2T [Nicotiana tabacum], gi\|51949804\|gb\|AAU14834....	227.0	[0..2]	[331..3]

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Predicted Domain #1

Region A:
Residues: [1-340]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSYILFGLE NPLLDYYVGG ETATLEKYGL KSNDAVLASE SQMGIYKEPC VSYSAGGAAQ  60
   61 NSCRAAQYVL PPNSTVFAGC VGQDKFADML LESNEKAGLR SEFSVDPTTP TGVCAVVLSN 120
  121 NNKNRSLCTN LGAANNYKLK DLQQPNVWKF VEEAKVIYVG GFHLTVSPES MLCLAQHANE 180
  181 NNKPYIMNLS APFLSQFFKE QMDSVIPYCD YVIGNEAEIL SYGENHGIKS TDVQEIALAL 240
  241 SSVEKVNKKR TRVVVITQGA DATIVAKDGK VTTYKPNRVP SEEIVDTNGA GDAFAGGFIA 300
  301 ALSQGQGIDY AVTLGHWLGQ ECIKVSGTTL PLPKKQFPLP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	57.221849
Match:	1bx4A
Description:	Adenosine kinase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits