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View Structure Prediction Details

Protein: lev-11
Organism: Caenorhabditis elegans
Length: 193 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lev-11.

Description E-value Query
Range
Subject
Range
gi|50761212 - gi|50761212|ref|XP_425913.1| PREDICTED: similar to cardiac tropomyosin [Gallus gallus]
145.0 [0..1] [193..407]

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Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLLEEELER AEERLKIATE KLEEATHNVD ESERVRKVME NRSLQDEERA NTVEAQLKEA  60
   61 QLLAEEADRK YDEVARKLAM VEADLERAEE RAEAGENKIV ELEEELRVVG NNLKSLEVSE 120
  121 EKALQREDSY EEQIRTVSSR LKEAETRAEF AERSVQKLQK EVDRLEELRD AEVLKARQLQ 180
  181 DELDHMVQEL NSV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.30103
Match: 2tmaA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

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