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View Structure Prediction Details

Protein: CE36142
Organism: Caenorhabditis elegans
Length: 216 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36142.

Description E-value Query
Range
Subject
Range
CE03066 - WBGene00007955 status:Partially_confirmed
266.0 [0..1] [213..12]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSGAIIIG LFFIASIFDV FRAEKEPPAE DSRLEDYLSS ELETTAIPTV VNENSHSQDV  60
   61 VDSGFSKDLP KLTILYCVSC GYKQAFNQFY EFAKEKYPGL VIEGGNFSPD FWKGCLAQIV 120
  121 GVAKIGLIAI 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [131-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VITGSNPFEY IGFGYPQILQ TAHYNRFSYS LLVFMIGNLF ESTLSSTGAF EIFLGDKQIW  60
   61 SKISKERVPT QEEFLNLIDL QLKTIR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 2ojlA
Description: No description for 2ojlA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle